Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq44 95.1 1e-14 seq35 84.2 2e-11 >seq44 Length=1723839 Score = 95.1 bits (104), Expect = 1e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 45151 CTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAA 45210 ||||||||||||||| || ||| | || || ||||| ||||| ||||| ||||| Sbjct 1003142 CTGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATCAA 1003083 Query 45211 CCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCAC 45270 ||||| ||||| || || | ||||| |||||| || || ||| || | | Sbjct 1003082 ACGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGAT 1003023 Query 45271 GCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGAT 45330 | |||| | ||||||||| | ||| || |||||||| || || ||||| || ||||| Sbjct 1003022 GGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACGAAGAT 1002963 Query 45331 TTGCATGTTG 45340 |||||| || Sbjct 1002962 CTGCATGATG 1002953 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCG--TTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203 || |||||||||||||||||| | ||| ||| | || || || || ||||| |||| Sbjct 1003434 TCTTTCTGAATGTTGTAGTCGGATAAAGT--GCGGCCATCTTCAAGCTGCTTTCCAGCGA 1003377 Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263 | ||||| ||||| ||||| || || | ||||| ||||| ||| ||| ||| || Sbjct 1003376 AGATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCTTGAATCTTTGACTTCACGT 1003317 Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323 | | | |||| | ||||||||| | ||| || |||||||| || || ||||| | Sbjct 1003316 TGTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGA 1003257 Query 45324 CAAAGATTTGCAT 45336 | || || ||||| Sbjct 1003256 CGAAAATCTGCAT 1003244 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||| || ||| ||| | || || Sbjct 1003908 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTGCGGCCATCTTCT 1003849 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || || || || |||| ||||| ||||| ||||| | || || || ||| | Sbjct 1003848 AACTGCTTACCAGCAAAGATCAGTCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCCTGA 1003789 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | || ||||||| || ||||||||| Sbjct 1003788 ATCTTGGACTTGACGTTATCGATGGTGTCTGAAGATTCGACCTCCAATGTGATCGTCTTG 1003729 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||||||| || ||||| ||||| Sbjct 1003728 CCAGTAAGAGTCTTAACGAAGATCTGCAT 1003700 >seq35 Length=1739444 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| ||||||||||| || ||| |||| || Sbjct 526069 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCCTCG 526010 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 || || || |||||||| |||| || || ||||| || || | |||||||||||| Sbjct 526009 AGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGGATACCCTCCTTGTC 525954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074968881008