Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq24 100 4e-16 seq1 86.0 9e-12 >seq24 Length=2647559 Score = 100 bits (110), Expect = 4e-16 Identities = 201/290 (69%), Gaps = 6/290 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| ||||||| || ||||| ||||||| || ||||| | |||||| | ||||| Sbjct 1440562 ATATGGCAAATGTATAAGAAGGCCGAGGCCTCGTTCTGGACTGCGGAAGAGATTGATCTC 1440621 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| | |||| ||| | | || ||| || || | | || || || Sbjct 1440622 TCCAAGGATTTACACGACTGGAACAACCGCCTGAACAAAGACGAACAATTCTTCATTTCA 1440681 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAA-TCTGTTGACACG 125197 ||| | | ||||||||||| | |||||| || || || ||||| || | ||||| || Sbjct 1440682 CACGTCCTCGCCTTCTTTGCTGCCTCCGACGGCATTGTGAACGAAAACTTGGTTGA-GCG 1440740 Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATG 125255 ||| | |||| | ||||| |||| ||| |||||||| || ||||| || ||| Sbjct 1440741 CTTCAGCGGCGAAGTTCA-GATTCCTGAGG-CTCGTTGCTTTTATGGCTTCCAGATTATG 1440798 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 || ||||| | |||||||| | || ||| || ||||| | ||||| Sbjct 1440799 ATGGAGAATATCCACTCGGAGACTTATTCTCTGCTCATTGATACCTACAT 1440848 >seq1 Length=3269259 Score = 86.0 bits (94), Expect = 9e-12 Identities = 156/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126 ||||| || || || |||||||| ||||||||| |||||| ||| || ||||||| || Sbjct 270962 GGCGACCTAGGACCCGTGTACGGGTTCCAGTGGCGGCACTTTGGCGCCGAGTATGTCGA- 271020 Query 70127 TGCG-AGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCT 70185 |||| | || || ||| |||| ||||| || ||||| ||| | || ||| ||| | Sbjct 271021 TGCGCAAACCGATTATGCGGGGCAGGGAGTCGATCAGTTGGCGCATATTATTCACAAGTT 271080 Query 70186 CAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCA 70245 || || || ||| ||||| | | || | | |||||||| ||| | | Sbjct 271081 GCGCACAAACCCGTTTGATCGGAGGTTGATTCTGAGTGCGTGGAATCCAAGGGATATTCC 271140 Query 70246 CCAAATGGCACTACCACCGTGTCAC-TGTTTGGCTCAGTTTTA 70287 || |||| || || |||||||| |||||| |||||||||| Sbjct 271141 GCAGATGGTTCTGCCGCCGTGTCATATGTTTG-CTCAGTTTTA 271182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058755364480