Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq44 136 9e-27
>seq44
Length=1723839
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| | || |||||||||||||| || ||||| |||| ||| | || ||
Sbjct 1003456 AAGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATC 1003397
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| || || |||||||| || || | | ||| || ||||| || || || ||||| ||
Sbjct 1003396 TTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTTGTC 1003337
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|||||||||| || || || || | ||| || || || ||||| || || |||||
Sbjct 1003336 TTGAATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGT 1003277
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| ||||| || || || || || ||||||||
Sbjct 1003276 CTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1003244
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || || ||||| ||||| | || ||||||| || || |||
Sbjct 1003896 GTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTGCGGCCATCTTCTAACTGCTTACCA 1003837
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||| || || ||||| || |||||||||||||||||||| | ||
Sbjct 1003836 GCAAAGATCAGTCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCCTGAATCTTGGACTTG 1003777
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| || || ||| ||||| | ||| || ||||| |||||||| ||
Sbjct 1003776 ACGTTATCGATGGTGTCTGAAGATTCGACCTCCAATGTGATCGTCTTGCCAGTAAGAGTC 1003717
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 1003716 TTAACGAAGATCTGCAT 1003700
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| |||||||||||||| || ||||| |||| ||| | || ||||| || || || |||
Sbjct 1003668 GTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCTTCAAGCTGCTTACCA 1003609
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | | ||| || || || || || || || ||||| |||||||||| ||
Sbjct 1003608 GCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCTTGAATCTTTGACTTC 1003549
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | |||||| | ||| ||||| | ||| || ||||| |||||||| ||
Sbjct 1003548 ACGTTGTCGATGGTATCTGATGATTCGACCTCCAATGTGATGGTCTTTCCAGTAAGAGTC 1003489
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 1003488 TTAACGAAGATCTGCAT 1003472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397691889984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |