Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq44 125 6e-24
>seq44
Length=1723839
Score = 125 bits (138), Expect = 6e-24
Identities = 157/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || | ||||| |||| |||||||| ||
Sbjct 1003244 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCA 1003303
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| ||||| |||| | ||| |||||||| || ||||||||||||||
Sbjct 1003304 GACACCATCGACAACGTGAAGTCAAAGATTCAA-GACAAAGAGGGCATTCCACCTGACCA 1003362
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || || || || || || | ||||||| |||||| | ||| |||||
Sbjct 1003363 GCAGCGTTTGATCTTCGCTGGAAAGCAGCTTGAAGATGGCCGCACTTTATCCGACTACAA 1003422
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| ||||||||||| || ||| | || ||
Sbjct 1003423 CATTCAGAAAGAATCCACTCTTCATCTCGTCCT 1003455
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||| | || || || |||||||| | || || || || ||
Sbjct 1003472 ATGCAGATCTTCGTTAAGACTCTTACTGGAAAGACCATCACATTGGAGGTCGAATCATCA 1003531
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || ||||| ||||| |||| | ||| || || || || ||||| || |||||
Sbjct 1003532 GATACCATCGACAACGTGAAGTCAAAGATTCAA-GATAAGGAGGGCATTCCCCCCGACCA 1003590
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || || || || || || | ||||||| |||||| | ||| |||||
Sbjct 1003591 GCAGCGTTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGCCGCACTTTATCCGACTACAA 1003650
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||||| |||||||||||||| ||
Sbjct 1003651 CATTCAGAAAGAATCCACGCTTCA 1003674
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || | ||||| |||| |||||||| |||
Sbjct 1002957 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACTATCACCCTCGAGGTGGAGTCTTCT 1003016
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| || ||| |||||||| || ||||||||||||||
Sbjct 1003017 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCACCTGACCAG 1003076
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || || || || || ||| | || |||| ||||| | || |||||
Sbjct 1003077 CAGCGTTTGATCTTCGCTGGAAAGCAACTCGAGGATGGCCGCACCCTCTCTGACTACAAC 1003136
Query 25179 ATTCA 25183
|||||
Sbjct 1003137 ATTCA 1003141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327746503120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |