Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq44 116 3e-21 seq35 93.3 4e-14 seq45 82.4 6e-11 >seq44 Length=1723839 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| ||| | || || || || |||| | || || ||| | | Sbjct 1003472 ATGCAGATCTTCGTTAAGACTCTTACTGGAAAGACCATCACATTGGAGGTCGAATCATCA 1003531 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || ||| |||||||| |||||||| ||||| ||||| || Sbjct 1003532 GATACCATCGACAACGTGAAGTCAAAGATTCAAGATAAGGAGGGCATTCCCCCCGACCAG 1003591 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || || || || ||| | || ||| |||||| | ||||| |||||| Sbjct 1003592 CAGCGTTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGCCGCACTTTATCCGACTACAAC 1003651 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| ||||||||||| Sbjct 1003652 ATTCAGAAAGAATCCAC 1003668 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || || || |||| || || ||||| | | Sbjct 1003244 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCA 1003303 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||| ||||||||||| ||||| |||||||| || || Sbjct 1003304 GACACCATCGACAACGTGAAGTCAAAGATTCAAGACAAAGAGGGCATTCCACCTGACCAG 1003363 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || || || || ||| | || ||| |||||| | ||||| |||||| Sbjct 1003364 CAGCGTTTGATCTTCGCTGGAAAGCAGCTTGAAGATGGCCGCACTTTATCCGACTACAAC 1003423 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| ||||||||||| Sbjct 1003424 ATTCAGAAAGAATCCAC 1003440 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| ||| | || || || ||| |||| | || || ||| | | Sbjct 1003700 ATGCAGATCTTCGTTAAGACTCTTACTGGCAAGACGATCACATTGGAGGTCGAATCTTCA 1003759 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || ||||| || || || || ||||| || || || Sbjct 1003760 GACACCATCGATAACGTCAAGTCCAAGATTCAGGATAAAGAAGGCATTCCTCCAGACCAG 1003819 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || |||||||| ||| |||||| | || ||||||||| Sbjct 1003820 CAGCGACTGATCTTTGCTGGTAAGCAGTTAGAAGATGGCCGCACTCTGTCTGATTACAAC 1003879 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 1003880 ATCCAGAAGGAGTCCAC 1003896 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || ||||| | | Sbjct 1002957 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACTATCACCCTCGAGGTGGAGTCTTCT 1003016 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||| ||||| |||||||| || || Sbjct 1003017 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCACCTGACCAG 1003076 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || || || || || | |||||| ||||||| |||| || |||||| Sbjct 1003077 CAGCGTTTGATCTTCGCTGGAAAGCAACTCGAGGATGGCCGCACCCTCTCTGACTACAAC 1003136 Query 22399 ATTCA 22403 ||||| Sbjct 1003137 ATTCA 1003141 >seq35 Length=1739444 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 ||||||||||||||| || || || || |||||||| || || |||||||| ||| | || Sbjct 525953 AGACAAGGAGGGTATCCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAGCAGCTCGA 526012 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 ||| |||||| | || || |||||||| || || || |||||| | || || || | Sbjct 526013 GGACGGCCGCACTCTTTCTGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTGCT 526072 Query 22431 GCGATTGCGCGGAGGT 22446 || |||| || ||| Sbjct 526073 CCGTCTGCGTGGTGGT 526088 >seq45 Length=1577698 Score = 82.4 bits (90), Expect = 6e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || || || || |||| ||||| || || || |||| ||| | Sbjct 1409912 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCAT 1409971 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || || || |||||||||||||| || || || || || ||||| Sbjct 1409972 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCT 1410031 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || ||||| || ||| | || ||| ||| || | ||| |||||||| || || Sbjct 1410032 GATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGTACTCTTAGCGACTACAACATCCAGAA 1410091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727754459120