Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq24 102 2e-16 seq15 100 6e-16 >seq24 Length=2647559 Score = 102 bits (112), Expect = 2e-16 Identities = 289/436 (66%), Gaps = 16/436 (4%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| |||||||||||| |||||||| ||| Sbjct 1441436 TCGAAGAAGTTGGTCTTGCCAGCAAGGGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTG 1441377 Query 251623 G---CATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679 | || ||||| |||| | ||||| || || |||| ||||| || || || || Sbjct 1441376 GAGTTATAGTACTTCTTG---TTACCAAGAGCAACCAAGAGACGGTCAGCGACGAATTCG 1441320 Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739 | ||||| | |||||| | |||||||| || | || ||| || | || || Sbjct 1441319 ATGTACTGGCACATCAGCTTCGAGTTCATTCCCAGCAAGGCACATGGGAGAGCATCGGTC 1441260 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAG 251795 | ||| || | ||| ||| ||| || || | || | | | ||||| || | Sbjct 1441259 AAGAACTCTTGCTCGATGGAAACAGCATCAGTGATGATGTCTTGAATAACCTGTTGGCTT 1441200 Query 251796 AGACAGCTTGTTCTCCAGCTTTGAGTACAG-GAGCTCGCCAAACTGTTGGTGCAGACCCT 251854 ||| | |||| || | ||| | || ||| || ||| | | || ||||||| Sbjct 1441199 GGAC-GAGTGTT---GAGGTGGGAGAAGAGCAAGCAGGCAAAATCGGT-ATGAAGACCCT 1441145 Query 251855 CGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGA 251914 | || ||| || | ||||||||| | | ||| |||||||||| ||||| ||| ||| Sbjct 1441144 CATCACGAGAAATCAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGACCACGCTTCTTGA 1441085 Query 251915 GCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAA 251974 ||||||| || | ||||| || ||||| | | |||||||| | | |||| Sbjct 1441084 GCCAGAAAATCGAAGCGAAGGAACCGGAGAAGAAAATTCCCTCGACTGCTGCGAAGGCAA 1441025 Query 251975 CAAGGCGCTCAGCAAA 251990 | || |||| |||||| Sbjct 1441024 CGAGTCGCTGAGCAAA 1441009 >seq15 Length=252517 Score = 100 bits (110), Expect = 6e-16 Identities = 97/122 (80%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760 ||||||| ||||| |||||| | ||||| |||||| || || |||| | | || Sbjct 5954 CTCACTCCCGCATGCGCGGTTTGTCTGGTGGCCAGCGTGTTAAGGTTGTTCTTGCTGCCT 5895 Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820 |||| ||||||| ||||||| |||||||||||||||||||||||||||| || ||||| Sbjct 5894 GCTCA-TGGCAACGCCCTCACTTGATCGTTCTCGACGAGCCTACCAACTACCTTGACCGT 5836 Query 280821 GA 280822 || Sbjct 5835 GA 5834 Score = 93.3 bits (102), Expect = 9e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220 || || |||| |||||||| ||||| ||||| || ||||| || | |||| ||| || Sbjct 6540 TCCCGTATTGCCGTCATTGGTCCCAACGGTGCCGGAAAGTCGACTTTGGTCAACGTCTTG 6481 Query 280221 ACTGGCGAGACCCAGGCCACTGAGGGGTCCGTT-TGGAAGCATCCCAACATGCGGATGGC 280279 || || ||| | ||||| || ||| | | | |||| ||||| || || || Sbjct 6480 ACCGGTGAGCTCATCCCCACT-AGTGGTGAGGTCTACCAGCACGAGAACATCCGTATTGC 6422 Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339 ||| || |||||||| ||| |||||| || |||||||| ||| ||||||| | | Sbjct 6421 CTACATCAAGCAGCACGCCTTCGCCCACATTGATAACCACCTTGACTCGACTCCTTCCGA 6362 Query 280340 ATACATTCAGTGGCG 280354 |||||||||||||| Sbjct 6361 GTACATTCAGTGGCG 6347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836167880368