Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq24 102 2e-16
seq15 100 6e-16
>seq24
Length=2647559
Score = 102 bits (112), Expect = 2e-16
Identities = 289/436 (66%), Gaps = 16/436 (4%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| | || ||||| |||||||||||| |||||||| |||
Sbjct 1441436 TCGAAGAAGTTGGTCTTGCCAGCAAGGGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTG 1441377
Query 251623 G---CATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679
| || ||||| |||| | ||||| || || |||| ||||| || || || ||
Sbjct 1441376 GAGTTATAGTACTTCTTG---TTACCAAGAGCAACCAAGAGACGGTCAGCGACGAATTCG 1441320
Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739
| ||||| | |||||| | |||||||| || | || ||| || | || ||
Sbjct 1441319 ATGTACTGGCACATCAGCTTCGAGTTCATTCCCAGCAAGGCACATGGGAGAGCATCGGTC 1441260
Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAG 251795
| ||| || | ||| ||| ||| || || | || | | | ||||| || |
Sbjct 1441259 AAGAACTCTTGCTCGATGGAAACAGCATCAGTGATGATGTCTTGAATAACCTGTTGGCTT 1441200
Query 251796 AGACAGCTTGTTCTCCAGCTTTGAGTACAG-GAGCTCGCCAAACTGTTGGTGCAGACCCT 251854
||| | |||| || | ||| | || ||| || ||| | | || |||||||
Sbjct 1441199 GGAC-GAGTGTT---GAGGTGGGAGAAGAGCAAGCAGGCAAAATCGGT-ATGAAGACCCT 1441145
Query 251855 CGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGA 251914
| || ||| || | ||||||||| | | ||| |||||||||| ||||| ||| |||
Sbjct 1441144 CATCACGAGAAATCAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGACCACGCTTCTTGA 1441085
Query 251915 GCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAA 251974
||||||| || | ||||| || ||||| | | |||||||| | | ||||
Sbjct 1441084 GCCAGAAAATCGAAGCGAAGGAACCGGAGAAGAAAATTCCCTCGACTGCTGCGAAGGCAA 1441025
Query 251975 CAAGGCGCTCAGCAAA 251990
| || |||| ||||||
Sbjct 1441024 CGAGTCGCTGAGCAAA 1441009
>seq15
Length=252517
Score = 100 bits (110), Expect = 6e-16
Identities = 97/122 (80%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760
||||||| ||||| |||||| | ||||| |||||| || || |||| | | ||
Sbjct 5954 CTCACTCCCGCATGCGCGGTTTGTCTGGTGGCCAGCGTGTTAAGGTTGTTCTTGCTGCCT 5895
Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820
|||| ||||||| ||||||| |||||||||||||||||||||||||||| || |||||
Sbjct 5894 GCTCA-TGGCAACGCCCTCACTTGATCGTTCTCGACGAGCCTACCAACTACCTTGACCGT 5836
Query 280821 GA 280822
||
Sbjct 5835 GA 5834
Score = 93.3 bits (102), Expect = 9e-14
Identities = 139/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220
|| || |||| |||||||| ||||| ||||| || ||||| || | |||| ||| ||
Sbjct 6540 TCCCGTATTGCCGTCATTGGTCCCAACGGTGCCGGAAAGTCGACTTTGGTCAACGTCTTG 6481
Query 280221 ACTGGCGAGACCCAGGCCACTGAGGGGTCCGTT-TGGAAGCATCCCAACATGCGGATGGC 280279
|| || ||| | ||||| || ||| | | | |||| ||||| || || ||
Sbjct 6480 ACCGGTGAGCTCATCCCCACT-AGTGGTGAGGTCTACCAGCACGAGAACATCCGTATTGC 6422
Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339
||| || |||||||| ||| |||||| || |||||||| ||| ||||||| | |
Sbjct 6421 CTACATCAAGCAGCACGCCTTCGCCCACATTGATAACCACCTTGACTCGACTCCTTCCGA 6362
Query 280340 ATACATTCAGTGGCG 280354
||||||||||||||
Sbjct 6361 GTACATTCAGTGGCG 6347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836167880368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |