Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq44 143 6e-29 seq45 93.3 1e-13 seq24 86.0 1e-11 >seq44 Length=1723839 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| |||||||||| ||| |||||| || || || ||||||| Sbjct 1003470 CCACCACGGAGACGAAGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCGGAT 1003411 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || ||||| | || ||||| |||||||||| |||||| || | ||| Sbjct 1003410 AAAGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTGGA 1003351 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || ||||| || || || || | |||||||| || || | || || || || Sbjct 1003350 ATGCCCTCTTTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTCCACC 1003291 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 1003290 TCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1003244 Score = 120 bits (132), Expect = 7e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 288289 TGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGA 288348 || || || ||||| | ||| ||||| || || || | ||| ||||| |||||||||| | Sbjct 1003141 TGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATCAAA 1003082 Query 288349 CGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408 ||||| || | ||| || || ||||| |||||||| || | || ||||| || || Sbjct 1003081 CGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATG 1003022 Query 288409 GAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATC 288468 | || || || || ||||| ||||| ||||| || || || ||||||||||| ||| Sbjct 1003021 GTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACGAAGATC 1002962 Query 288469 TGCATTATG 288477 ||||| ||| Sbjct 1002961 TGCATGATG 1002953 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || |||| || || | |||| ||| || || ||||| || || || | Sbjct 1003926 CCACCCCGAAGTCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGAC 1003867 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || |||||||| || || || || |||||||| ||||| || ||||| Sbjct 1003866 AGAGTGCGGCCATCTTCTAACTGCTTACCAGCAAAGATCAGTCGCTGCTGG---TCTGGA 1003810 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||||||||| || || | || ||||| || || | || ||||| Sbjct 1003809 GGAATGCCTTCTTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCTGAAGATTCG 1003750 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||||||||| || || |||||||| ||||| |||||||| Sbjct 1003749 ACCTCCAATGTGATCGTCTTGCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003700 >seq45 Length=1577698 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || || || || ||||| | || ||||| ||||||||| Sbjct 1410091 TTCTGGATGTTGTAGTCGCTAAGAGTACGGCCATCTTCAAGCTGCTTTCCGGCGAAGATC 1410032 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||| || ||||| || || || |||||||| || | || || || || Sbjct 1410031 AGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1409972 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | ||| || || || || || ||||| ||||| || || || ||||||||||| Sbjct 1409971 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1409913 >seq24 Length=2647559 Score = 86.0 bits (94), Expect = 1e-11 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 269098 GAAGCAGTTACAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGT 269157 || || ||| | | ||| |||||||| | || ||| |||||||| | || | || Sbjct 1441231 GATGCTGTTTCCATCGAGCAAGAGTTCTTGACCGATGCTCTCCCATGTGCCTTGCTGGGA 1441290 Query 269158 ATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCA 269217 ||||| | | || ||| || || ||||||||||| ||||| ||| |||| || Sbjct 1441291 ATGAACTCGAAGCTGATGTGCCAGTACATCGAATTCGTCGCTGACCGTCTCTTGGTTGCT 1441350 Query 269218 CTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCG 269277 || ||| | |||| || || || | || ||||| | ||| ||||| || || Sbjct 1441351 CTTGGTAACAAGAAGTACTATAACTCCACCAACCCCTTTGACTTCATGGAGAACATCTCC 1441410 Query 269278 CTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 || | || ||||| ||||||||||| || |||||| | ||||| || Sbjct 1441411 CTTGCTGGCAAGACCAACTTCTTCGAGAAACGTGTCGGTGACTACCA 1441457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653674512544