Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq44 107 2e-18
>seq44
Length=1723839
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058
|||||| || | ||| |||||| || || |||||||||| |||||| || | || ||
Sbjct 1003909 CACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTGCGGCCATCTTC 1003850
Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118
|| |||||||||||| || || |||||||||||||| | || | || || || ||| |
Sbjct 1003849 TAACTGCTTACCAGCAAAGATCAGTCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCC-T 1003791
Query 42119 GATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177
|| | || | |||| | | | ||||| ||||| || || | ||||| || |
Sbjct 1003790 GAATCTTGGACTTGACGTTATCGATGGTGTCTGAAGATTCGACCTCCAATGTGATCGTCT 1003731
Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| || || ||||| || ||||| |||||
Sbjct 1003730 TGCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003700
Score = 95.1 bits (104), Expect = 1e-14
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 42024 TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGT 42083
||||| ||||| |||| || || || | || || || ||||| |||||||| || |
Sbjct 1003141 TGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATCAAA 1003082
Query 42084 CGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCAC 42142
||||||||||| | ||| | || ||| |||||| ||| || |||| ||| | | |
Sbjct 1003081 CGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGA-CGTTGTCGAT 1003023
Query 42143 CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGAT 42202
||||| || ||||| |||| ||||| || ||||| || || ||||| || |||||
Sbjct 1003022 GGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACGAAGAT 1002963
Query 42203 TTGCAT 42208
|||||
Sbjct 1002962 CTGCAT 1002957
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
|| || ||||| ||||| || | | ||| || | || || |||||||| ||||||||
Sbjct 1003434 TCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAG 1003375
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| | ||||||||||| | ||| | || ||| |||| | ||| | |||| | |||
Sbjct 1003374 ATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTTGT-CTTGAATCTTTGACTTCACGTT 1003316
Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | ||||| || ||||| |||| ||||| || ||||| || || ||||| ||
Sbjct 1003315 GTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGAC 1003256
Query 42197 AAAGATTTGCAT 42208
|| || |||||
Sbjct 1003255 GAAAATCTGCAT 1003244
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
|| || ||||| ||||| || | | ||| || | || || |||||||||||||||||
Sbjct 1003662 TCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAG 1003603
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| | ||||||||||||| || | || |||||| | | ||| | |||| | |||
Sbjct 1003602 ATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTAT-CTTGAATCTTTGACTTCACGTT 1003544
Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | || || ||||| || || | |||||||| || || || || ||||| ||
Sbjct 1003543 GTCGATGGTATCTGATGATTCGACCTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTAAC 1003484
Query 42197 AAAGATTTGCAT 42208
||||| |||||
Sbjct 1003483 GAAGATCTGCAT 1003472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212474072320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |