Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq44 120 3e-22
seq24 91.5 1e-13
seq45 86.0 6e-12
>seq44
Length=1723839
Score = 120 bits (132), Expect = 3e-22
Identities = 149/199 (75%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || ||||| ||||| ||||| ||| | ||||| ||| || ||||| ||||||
Sbjct 1003440 GTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCTTCAAGCTGCTTTCCA 1003381
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTT 127035
||| ||||||| |||||||| || || || |||||||| ||||| ||| | | || |||
Sbjct 1003380 GCGAAGATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCT-TGAATCTTTGACTT 1003322
Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094
| ||||| ||| |||||| | | ||| || |||| ||| | || ||||| || || |
Sbjct 1003321 CACGTTGT-CGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGG 1003263
Query 127095 TTTTTACAAAAATCTGCAT 127113
| || || |||||||||||
Sbjct 1003262 TCTTGACGAAAATCTGCAT 1003244
Score = 98.7 bits (108), Expect = 9e-16
Identities = 145/200 (73%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975
||| || ||||| ||||| ||||| ||| | ||||| ||| || ||||| || ||
Sbjct 1003669 CGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCTTCAAGCTGCTTACC 1003610
Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CT 127034
|||| ||||||| |||||||| ||||| || ||||||||||| | | ||| | | || ||
Sbjct 1003609 AGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTAT-CTTGAATCTTTGACT 1003551
Query 127035 TGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGA 127093
| | |||| |||| ||| || | ||||| || | || | || || || || |||
Sbjct 1003550 TCACGTTG-TCGATGGTATCTGATGATTCGACCTCCAATGTGATGGTCTTTCCAGTAAGA 1003492
Query 127094 GTTTTTACAAAAATCTGCAT 127113
|| || || || ||||||||
Sbjct 1003491 GTCTTAACGAAGATCTGCAT 1003472
>seq24
Length=2647559
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 6/217 (3%)
Strand=Plus/Plus
Query 47365 CCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGG 47424
|||| ||| ||||| || |||| ||||| || | || ||||||||||| ||
Sbjct 1441241 CCATCGAGCAAGAGTTCTTGACCGATGCTCTCCCATGTGCCTTGCTGGGAATGAACTCGA 1441300
Query 47425 AGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATC 47484
|| ||||| | ||||||||||||| ||||| ||||| || | ||| ||| | |
Sbjct 1441301 AGCTGATGTGCCAGTACATCGAATTCGTCGCTGACCGTCTCTTGGTT--GCTCTTG-GTA 1441357
Query 47485 CCAAGATTTAC---CACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGG 47541
||||| ||| || || || || || || || ||| | ||||| || || | |
Sbjct 1441358 ACAAGAAGTACTATAACTCCACCAACCCCTTTGACTTCATGGAGAACATCTCCCTTGCTG 1441417
Query 47542 GCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
||||||||||||| |||||||| || ||||| || ||
Sbjct 1441418 GCAAGACCAACTTCTTCGAGAAACGTGTCGGTGACTA 1441454
>seq45
Length=1577698
Score = 86.0 bits (94), Expect = 6e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| | || || ||| || ||||| ||||| ||| |||||
Sbjct 1410091 TTCTGGATGTTGTAGTCGCTAAGAGTACGGCCATCTTCAAGCTGCTTTCCGGCGAAGATC 1410032
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
| |||||||| || || || || |||||||||||| ||| || ||||| | |||
Sbjct 1410031 AGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1409972
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105
| |||||| | |||||| || | ||| | || ||||| || || || || || |||
Sbjct 1409971 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAA 1409912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500514699520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |