Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq46 174 2e-38
seq24 149 8e-31
>seq46
Length=1567519
Score = 174 bits (192), Expect = 2e-38
Identities = 924/1455 (64%), Gaps = 47/1455 (3%)
Strand=Plus/Plus
Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCA---GGCATACATATGCATTGAGGACAAC 115620
|||||||| || ||||| || ||| |||||| |||| | |||||| || | |
Sbjct 835533 TAGTACATTCCGGTCTTTAGACCCATCTTCCAACCGGCAAA---ATGCATGCTGGTAATC 835589
Query 115621 TTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATG-AAGCG 115679
||| | || || || |||| | ||| | ||| ||||| || ||| ||||
Sbjct 835590 TTGCCCATAGTAGGCTCTTTCATGTGAATGTTGAGCGATTGCGATTGGTCAATGTAAGCA 835649
Query 115680 TCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGTTCT 115736
|| |||||||| ||||| | || | | ||| || ||| ||||| || || |
Sbjct 835650 -CCGCGATCCGCAGCCATTTGAAGAA--TTGTTCG-CTGAGAGATCTCCCAGACTGTCTT 835705
Query 115737 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTT 115796
||||| ||| |||||| | ||||| | ||||||||| ||||| || ||| |
Sbjct 835706 ATAGAGAGCCTTGATATCAGCGGGGATGTTGGGGATATTTTGAATAGATCCCCCTTCAGC 835765
Query 115797 GACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAG 115856
| ||| | | |||||| | | ||||||||||| | | || |||| || |||
Sbjct 835766 TATAATGCGGTTCTTCATGTTGTCGGACCAGAGACCGAGGTCAACCAGGTCCTTCAGGAG 835825
Query 115857 GTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCG 115915
||||| || ||||| || || | | || | ||| |||||||| | |
Sbjct 835826 CCATGGGTTGACCACTTGGAACTCGCCAGCCAAGACACGACG-AGAGTAGATGTTCGAGG 835884
Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG-TGGAGGCTGTGGGCATG 115974
|||| || || ||||| |||||| | || ||| | ||||| | || ||||||||
Sbjct 835885 TGTAAGGTTCGAAGCATTCATTGA-AGCCTAGAATCTGGCTGGTACTAGCGGTGGGCATA 835943
Query 115975 GGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCC 116034
|| || | ||||| |||||||||| ||| | ||||| |||| | || |||
Sbjct 835944 GGAGCAACAAGAAGACTGTTGCGGACACCATGCTGGCTAATTTCAGCCTTCAAGGAATCC 836003
Query 116035 CAGTCGTAGTTGAGCT-TTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGA 116093
||||| | || || ||| | |||||||| ||||| ||||||||||| || ||
Sbjct 836004 CAGTCCCAAA-GATCTGTTGGAGTGCGATCCCACATGTCAAATTGGAGGATACCCTGAGA 836062
Query 116094 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC----GGAGC 116149
| || || |||| | ||||| || | ||| | | | || | || | |||
Sbjct 836063 GACAGGAGAACCCTTGTAAGTCTCGTAGGTGCCGTATTCTTTGGCAAGCTCTATGGAAGC 836122
Query 116150 TCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCT 116209
| | | || |||| || || |||||||| || | ||| | ||||||||
Sbjct 836123 TGTC----AATGCACCGTGGTAGATGGTCTCAAAGATTTGTATATTGAGCTGCTTGGCCT 836178
Query 116210 CGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 116269
| | || ||||| | |||||| || || |||| || | || | |||||| |
Sbjct 836179 CTGCAGAGTCAAATGGCAGACGGAGAGCAAGGAAAGCATCAGCCAAGCCATTGACACCAA 836238
Query 116270 GGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAAT 116326
|||| || || || | | ||| ||||| || ||| ||||||||| | |
Sbjct 836239 CTGCAATAGGACGGTGGCGGAAATTGCTCTTTCTGGC---CTCAGGGACGGGATAATAGT 836295
Query 116327 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 116386
| ||||||| | | | || || ||| | |||| |||| ||| ||||| ||
Sbjct 836296 TGATATCGATGATCTTGTTGAGGTTTCGAACAAGGACCTGGGTGACTTCGTGAAGTTTGC 836355
Query 116387 CGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 116443
| | ||| | || ||||| ||| ||| | |||| || || | || ||||
Sbjct 836356 CAAAGTCATATTCACCGCGAGCGGTATCA---ACAAAAGTAGGCAGAGCAAGGGAAGCCA 836412
Query 116444 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 116503
||||| |||| | ||||| | | ||| || ||||| || ||||| | || |
Sbjct 836413 AGTTACAAACAGCGACTTCATCAGGAGCGCAGTATTCGATAATCTCGGTACAGAGGTTAG 836472
Query 116504 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGA 116563
|||| ||| ||||| | |||||||| || ||| |||| || ||||||||||| |
Sbjct 836473 AACTGCGAATAGTGCCAAGATTCTTTTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAAA 836532
Query 116564 GCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGG 116623
|||| | || | || ||||| || || | || ||| || || | ||| | | ||
Sbjct 836533 GCATGAAAGGATTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCAGAGTTTCTGGG 836592
Query 116624 CTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAA 116681
| |||||| |||| | | || || |||| ||||| || || || || || ||
Sbjct 836593 CCTTCACAGTACGGCG--GCCGCGACCTTCCTTTTCGTATTTCTCATAAAGAGCATCGAA 836650
Query 116682 CTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTG 116741
||||||||| | || | || ||||| || | || ||||||||| |||| ||| |
Sbjct 836651 CTCTTCACCGTAGACATCGGCAAGACCTGGGGCTTCATTTGGACAGAACAGAGTCCAGTC 836710
Query 116742 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 116801
| |||| || || |||||| ||||| || |||| | || |||| |||||
Sbjct 836711 CTTGTTCGCCTCCACACGGCGCATGAAAAGGTCAGGAGTCCACAAAGCGTAGAAAAGATC 836770
Query 116802 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 116861
|| || ||||||| | || || || ||| | || | || || | || |||
Sbjct 836771 ACGGGCACGGACTTCTTCTTTTCCATGGTTCTTACGAAGGTCGAGGAACTCAAAGACATC 836830
Query 116862 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTT 116918
| ||||||||| |||||||| | || | || || ||| ||| | ||||
Sbjct 836831 TGAGTGCCACGGCTCCAGGTAGATAGCAAATGCACCAGGGCGTTTGTTACCTCCTTGGTC 836890
Query 116919 TACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 116978
|| ||||| || || ||| || || | ||||| |||| || ||| | || |||
Sbjct 836891 AACGTACCTAGCGGTGTTGTTGAAGACTCTGAGCATAGGAACGAGACCGTTTGAAGTGCC 836950
Query 116979 ATTTGTCCCCCGAAT 116993
||| || || | |||
Sbjct 836951 ATTCGTTCCTCCAAT 836965
>seq24
Length=2647559
Score = 149 bits (164), Expect = 8e-31
Identities = 312/458 (68%), Gaps = 18/458 (4%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| ||||| || |||||||||||||| ||||| ||| | ||| ||| ||||||||
Sbjct 1441455 GTAGTCACCGACACGTTTCTCGAAGAAGTTGGTCTTGCCAGCAAGGGAGATGTTCTCCAT 1441396
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCC----CAATCTGTTTGAG 127344
|| ||||| ||||| | ||||| | | || ||| ||| ||| | |
Sbjct 1441395 GAAGTCAAAGGGGTTGGTGGAGTTATAGTACTTCTTGTTACCAAGAGCAACC------AA 1441342
Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404
|||||| || | |||| | || ||||||| ||||| || |||||||| || | |
Sbjct 1441341 GAGACGGTCAGCGACGAATTCGATGTACTGGCACATCAGCTTCGAGTTCATTCCCAGCAA 1441282
Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464
| ||||||||| || || | |||| | | ||| ||| ||||| || | |||
Sbjct 1441281 GGCACATGGGAGAGCATCGGTCAAGAACTCTTGCTCGATGGAAACAGCATCAGTGATGAT 1441222
Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCA-CAG-C 127521
| | |||||| | | || | | || | | || |||||| | | ||| |
Sbjct 1441221 GTCTTGAATAACCTGTTGGCTTGGACGAGTGT-TGAGGTGGGAGAAGAG--CAAGCAGGC 1441165
Query 127522 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 127581
||| || || |||||||| ||||| || || || || || ||||| |||||| ||
Sbjct 1441164 AAAATCGGTATGAAGACCCTCATCACGAGAAATCAGCTCGTTGGAGAAAGTCAGACCAGG 1441105
Query 127582 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 127641
||| ||||| |||||||| | ||||||||||| | || || || |||||||| || ||
Sbjct 1441104 CATCAGACCACGCTTCTTGAGCCAGAAAATCGAAGCGAAGGAACCGGAGAAGAAAATTCC 1441045
Query 127642 CTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679
||| || ||||| |||| || |||| |||||||
Sbjct 1441044 CTCGACTGCTGCGAAGGCAACGAGTCGCTGAGCAAAGG 1441007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506831895680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |