Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq44 163 7e-35
seq45 116 9e-21
seq35 96.9 8e-15
>seq44
Length=1723839
Score = 163 bits (180), Expect = 7e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||||| || || | ||| ||||| |||||||| |||| |||||| |||| || |||
Sbjct 1003920 CGAAGTCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTG 1003861
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||| | |||||| || || ||||| || ||||||||||| ||| ||| |||
Sbjct 1003860 CGGCCATCTTCTAACTGCTTACCAGCAAAGATCAGTCGCTGCTGGTCTGGAGGAATGCCT 1003801
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| ||||||||||| ||| ||| |||| |||||||| | ||| || |||||
Sbjct 1003800 TCTTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCTGAAGATTCGACCTCCAAT 1003741
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || || ||||| || || || || ||
Sbjct 1003740 GTGATCGTCTTGCCAGTAAGAGTCTTAACGAAGATCTG 1003703
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||||||||| || || || || || || | ||||||||| | ||||| | ||||||
Sbjct 1003683 AGGACAAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCT 1003624
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| | |||||||||||| || ||| || || ||
Sbjct 1003623 TCAAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCT 1003564
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
||||||||| ||||||| |||| ||| |||| || ||| || ||||| ||||| |||
Sbjct 1003563 TGAATCTTTGACTTCACGTTGTCGATGGTATCTGATGATTCGACCTCCAATGTGATGGTC 1003504
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || ||||| || || || || ||
Sbjct 1003503 TTTCCAGTAAGAGTCTTAACGAAGATCTG 1003475
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| || || ||||| || || || || | ||||||||| | ||||| | ||||||
Sbjct 1003455 AGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCT 1003396
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||||||||| |||||||| | |||||||||||| || ||| || ||| ||
Sbjct 1003395 TCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCT 1003336
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
||||||||| ||||||| |||| |||||||| | || || || | ||||| |||
Sbjct 1003335 TGAATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGTC 1003276
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || ||||| ||
Sbjct 1003275 TTGCCAGTGAGGGTCTTGACGAAAATCTG 1003247
Score = 95.1 bits (104), Expect = 3e-14
Identities = 127/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 199450 GTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTG 199509
||||||||||| | || | ||||| || || |||||||| |||||||| | ||||||
Sbjct 1003136 GTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATCAAACGCTG 1003077
Query 199510 CTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569
|||||| || ||| || ||| ||||| ||||| ||| ||| |||| ||||||
Sbjct 1003076 CTGGTCAGGTGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTC 1003017
Query 199570 TGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
| | || || || | ||||| ||||| || ||||| || || || || || ||
Sbjct 1003016 AGAAGACTCCACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACGAAGATCTG 1002960
>seq45
Length=1577698
Score = 116 bits (128), Expect = 9e-21
Identities = 137/183 (75%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAA-AGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498
|||| |||| ||||||||| || || ||| | |||||||| ||||||||||||||||||
Sbjct 1410093 CCTTCTGGATGTTGTAGTC-GCTAAGAGTACGGCCATCTTCAAGCTGCTTTCCGGCGAAG 1410035
Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558
|| ||||||||||||||||| || || || ||||| ||||| ||| ||
Sbjct 1410034 ATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTG 1409975
Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618
|||| |||||| | | || || || | ||||| ||||| |||||||| || || ||
Sbjct 1409974 TCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 1409915
Query 199619 AAA 199621
|||
Sbjct 1409914 AAA 1409912
>seq35
Length=1739444
Score = 96.9 bits (106), Expect = 8e-15
Identities = 82/101 (81%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | |||||| || |||||||| |||| ||||||||||| | ||| | || ||
Sbjct 526072 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCC 526013
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||| ||||||||||| ||||| |||||||||||
Sbjct 526012 TCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGG 525972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178920874963216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |