Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq44 109 6e-19
seq45 102 9e-17
seq35 98.7 1e-15
>seq44
Length=1723839
Score = 109 bits (120), Expect = 6e-19
Identities = 141/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
|| || || || ||||||||||||| |||||| | || || |||||||| || |||||
Sbjct 1003662 TCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAG 1003603
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||| ||||||||||||| || | || |||||| || ||||| ||| | |||
Sbjct 1003602 ATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCTTGAATCTTTGACTTCA-CGTT 1003544
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | || || ||||| || |||| |||||||| || || || || || |||||
Sbjct 1003543 GTCGATGGTATCTGATGATTCGACCTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTAAC 1003484
Query 46582 AAAGATTTGCAT 46593
||||| |||||
Sbjct 1003483 GAAGATCTGCAT 1003472
Score = 104 bits (114), Expect = 3e-17
Identities = 136/186 (73%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 46409 TGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAG 46468
|| || |||||||| || || ||||| | || ||||| ||||| || ||||| |||||
Sbjct 1003141 TGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATCAAA 1003082
Query 46469 CGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCAC 46527
||||||||||| | || | || ||| |||||| |||||| ||||| ||| | | |
Sbjct 1003081 CGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGA-CGTTGTCGAT 1003023
Query 46528 CGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGAT 46587
||||| || ||||| || | ||||| || ||||| || || || || || |||||
Sbjct 1003022 GGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACGAAGAT 1002963
Query 46588 TTGCAT 46593
|||||
Sbjct 1002962 CTGCAT 1002957
Score = 96.9 bits (106), Expect = 4e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
|| || || || ||||||||||||| |||||| | || || |||||||| || |||||
Sbjct 1003434 TCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAG 1003375
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||| ||||||||||| | || | || ||| ||||| ||||| ||| | |||
Sbjct 1003374 ATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCTTGAATCTTTGACTTCA-CGTT 1003316
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | ||||| || ||||| || | ||||| || ||||| || || || || ||
Sbjct 1003315 GTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGAC 1003256
Query 46582 AAAGATTTGCAT 46593
|| || |||||
Sbjct 1003255 GAAAATCTGCAT 1003244
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || || |||||||| | || || | |||||| || || ||
Sbjct 1003891 CTCCTTCTGGATGTTGTAATCAGACAGAGTGCGGCCATCTTCTAACTGCTTACCAGCAAA 1003832
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| ||||||||||| | || | || || || ||| ||||| ||||| |
Sbjct 1003831 GATCAGTCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCCTGAATCTTGGACTTGACGTT 1003772
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| ||||| || |||| ||||| || ||||| || || || |||||
Sbjct 1003771 ATCGATGGTGTCTGAAGATTCGACCTCCAATGTGATCGTCTTGCCAGTAAGAGTCTTAAC 1003712
Query 46582 AAAGATTTGCAT 46593
||||| |||||
Sbjct 1003711 GAAGATCTGCAT 1003700
>seq45
Length=1577698
Score = 102 bits (112), Expect = 9e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||| ||||| || | || || |||||||| |||||||| |
Sbjct 1410093 CCTTCTGGATGTTGTAGTCGCTAAGAGTACGGCCATCTTCAAGCTGCTTTCCGGCGAAGA 1410034
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| ||||||||||| | || | | |||||||||| |||||| ||||| |
Sbjct 1410033 TCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1409974
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | |||||| || || || || | |||||||| |||||||| || || || || |
Sbjct 1409973 CGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 1409914
Query 46584 A 46584
|
Sbjct 1409913 A 1409913
>seq35
Length=1739444
Score = 98.7 bits (108), Expect = 1e-15
Identities = 81/99 (82%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || |||||||| |||| ||||||||||||||||||||
Sbjct 526052 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 525993
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|||| || |||||||| | || | | |||||||||
Sbjct 525992 GATCAGACGTTGCTGGTCCGGGGGGATACCCTCCTTGTC 525954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238060856960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |