Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq45 111 2e-19
seq44 100 3e-16
seq35 89.7 5e-13
>seq45
Length=1577698
Score = 111 bits (122), Expect = 2e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| ||||||||| | || |||||| || |||||| | |
Sbjct 1409913 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 1409972
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| ||||| || ||| | ||||| ||||| ||
Sbjct 1409973 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTG 1410032
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| || || ||||| || || | || || || | ||||||||||||||| |||
Sbjct 1410033 ATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGTACTCTTAGCGACTACAACATCCAGAAG 1410092
Query 38433 G 38433
|
Sbjct 1410093 G 1410093
>seq44
Length=1723839
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| || |||||| |||| || ||| | |
Sbjct 1003244 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCA 1003303
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || ||| || | ||||||||||| ||||| | |||||
Sbjct 1003304 GACACCATCGACAACG-TGAAGTCAAAGATTCAAGACAAAGAGGGCATTCCACCTGACCA 1003362
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||| || || ||||| || || | ||||| | |||||||||
Sbjct 1003363 GCAGCGTTTGATCTTCGCTGGAAAGCAGCTTGAAGATGGCCGCACTTTATCCGACTACAA 1003422
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| || || ||| | || || ||| | || || |||
Sbjct 1003423 CATTCAGAAAGAATCCACTCTTCATCTCGTCCTTCGT 1003459
Score = 95.1 bits (104), Expect = 1e-14
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| || |||||| |||| || ||| | |
Sbjct 1002957 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACTATCACCCTCGAGGTGGAGTCTTCT 1003016
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || || |||| ||||||||||| ||||| | |||||
Sbjct 1003017 GACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCACCTGACCA 1003075
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||| || || || || || || | ||||||||| ||||||||
Sbjct 1003076 GCAGCGTTTGATCTTCGCTGGAAAGCAACTCGAGGATGGCCGCACCCTCTCTGACTACAA 1003135
Query 38423 CATCCA 38428
||| ||
Sbjct 1003136 CATTCA 1003141
Score = 82.4 bits (90), Expect = 8e-11
Identities = 150/217 (69%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || || || |||||||| | || ||||| | |
Sbjct 1003472 ATGCAGATCTTCGTTAAGACTCTTACTGGAAAGACCATCACATTGGAGGTCGAATCATCA 1003531
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || ||| || | || || ||||| |||||| |||||||
Sbjct 1003532 GATACCATCGACAACG-TGAAGTCAAAGATTCAAGATAAGGAGGGCATTCCCCCCGACCA 1003590
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||| || || ||||| || || | ||||| | |||||||||
Sbjct 1003591 GCAGCGTTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGCCGCACTTTATCCGACTACAA 1003650
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| || || ||| | ||||| || | || || |||
Sbjct 1003651 CATTCAGAAAGAATCCACGCTTCACCTTGTCCTCCGT 1003687
>seq35
Length=1739444
Score = 89.7 bits (98), Expect = 5e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| ||||| || ||| | ||||| || || || || | ||| ||||| ||||| ||
Sbjct 525954 GACAAGGAGGGTATCCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAGCAGCTCGAG 526013
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| ||||| || |||||||||||||| ||||| | || || || ||||||||
Sbjct 526014 GACGGCCGCACTCTTTCTGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTC 526073
Query 38457 CGTTTGAGAGGCGG 38470
||| || | || ||
Sbjct 526074 CGTCTGCGTGGTGG 526087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172499896320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |