Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq46 113 5e-20
seq24 96.9 4e-15
>seq46
Length=1567519
Score = 113 bits (124), Expect = 5e-20
Identities = 214/315 (68%), Gaps = 0/315 (0%)
Strand=Plus/Plus
Query 48263 TTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGG 48322
|||||| || ||| ||| | ||| || || || || | | ||| | ||||| ||
Sbjct 836783 TTCTTCTTTTCCATGGTTCTTACGAAGGTCGAGGAACTCAAAGACATCTGAGTGCCACGG 836842
Query 48323 TTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGC 48382
|| | || || || | | |||| || ||||| ||||||||||| || | || || ||
Sbjct 836843 CTCCAGGTAGATAGCAAATGCACCAGGGCGTTTGTTACCTCCTTGGTCAACGTACCTAGC 836902
Query 48383 AGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGA 48442
|| ||||| | ||||| | ||| || || | ||| ||||| | ||||| |||||
Sbjct 836903 GGTGTTGTTGAAGACTCTGAGCATAGGAACGAGACCGTTTGAAGTGCCATTCGTTCCTCC 836962
Query 48443 AATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTT 48502
||| || ||| |||| | ||| || || ||| |||||||| || | ||
Sbjct 836963 AATGTAGGAACCAGTAGCACGAATACGGTGAACATTAAGACCGATACCACCAGCATTCTT 837022
Query 48503 AGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCAT 48562
|| || | |||||| ||||| ||||||||||| || || ||||||||||| ||||
Sbjct 837023 GGAGATCATAGCACATGTCTTAAGCGTATCATAAATGCCGTCAATACTATCATCCTTCAT 837082
Query 48563 ATTTAATAGAAAACA 48577
|| | || |||||
Sbjct 837083 ATCCACAAGGAAACA 837097
>seq24
Length=2647559
Score = 96.9 bits (106), Expect = 4e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 18957 CAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGT 19016
||| || |||||||| ||| || ||||| || | | |||| || || || || ||
Sbjct 1441173 CAAGCAGGCAAAATCGGTATGAAGACCCTCATCACGAGAAATCAGCTCGTTGGAGAAAGT 1441114
Query 19017 TAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAA 19076
| |||||||||||| || | || || | |||||| || ||||| || || || || ||
Sbjct 1441113 CAGACCAGGCATCAGACCACGCTTCTTGAGCCAGAAAATCGAAGCGAAGGAACCGGAGAA 1441054
Query 19077 GAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATT 19136
||| || || || |||||||| || ||||| |||| | || | ||| || || |
Sbjct 1441053 GAAAATTCCCTCGACTGCTGCGAAGGCAACGAGTCGCTGAGCAAAGGTAGATTCCTTGTC 1440994
Query 19137 ATGAATCCATTTCAGTGCCCAATCAGCCTTCTT 19169
|||||| || ||||| |||||||||||
Sbjct 1440993 CGAAATCCAGCGCAAGGCCCAGTCAGCCTTCTT 1440961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108462734720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |