Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq46 113 5e-20 seq24 96.9 4e-15 >seq46 Length=1567519 Score = 113 bits (124), Expect = 5e-20 Identities = 214/315 (68%), Gaps = 0/315 (0%) Strand=Plus/Plus Query 48263 TTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGG 48322 |||||| || ||| ||| | ||| || || || || | | ||| | ||||| || Sbjct 836783 TTCTTCTTTTCCATGGTTCTTACGAAGGTCGAGGAACTCAAAGACATCTGAGTGCCACGG 836842 Query 48323 TTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGC 48382 || | || || || | | |||| || ||||| ||||||||||| || | || || || Sbjct 836843 CTCCAGGTAGATAGCAAATGCACCAGGGCGTTTGTTACCTCCTTGGTCAACGTACCTAGC 836902 Query 48383 AGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGA 48442 || ||||| | ||||| | ||| || || | ||| ||||| | ||||| ||||| Sbjct 836903 GGTGTTGTTGAAGACTCTGAGCATAGGAACGAGACCGTTTGAAGTGCCATTCGTTCCTCC 836962 Query 48443 AATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTT 48502 ||| || ||| |||| | ||| || || ||| |||||||| || | || Sbjct 836963 AATGTAGGAACCAGTAGCACGAATACGGTGAACATTAAGACCGATACCACCAGCATTCTT 837022 Query 48503 AGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCAT 48562 || || | |||||| ||||| ||||||||||| || || ||||||||||| |||| Sbjct 837023 GGAGATCATAGCACATGTCTTAAGCGTATCATAAATGCCGTCAATACTATCATCCTTCAT 837082 Query 48563 ATTTAATAGAAAACA 48577 || | || ||||| Sbjct 837083 ATCCACAAGGAAACA 837097 >seq24 Length=2647559 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18957 CAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGT 19016 ||| || |||||||| ||| || ||||| || | | |||| || || || || || Sbjct 1441173 CAAGCAGGCAAAATCGGTATGAAGACCCTCATCACGAGAAATCAGCTCGTTGGAGAAAGT 1441114 Query 19017 TAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAA 19076 | |||||||||||| || | || || | |||||| || ||||| || || || || || Sbjct 1441113 CAGACCAGGCATCAGACCACGCTTCTTGAGCCAGAAAATCGAAGCGAAGGAACCGGAGAA 1441054 Query 19077 GAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATT 19136 ||| || || || |||||||| || ||||| |||| | || | ||| || || | Sbjct 1441053 GAAAATTCCCTCGACTGCTGCGAAGGCAACGAGTCGCTGAGCAAAGGTAGATTCCTTGTC 1440994 Query 19137 ATGAATCCATTTCAGTGCCCAATCAGCCTTCTT 19169 |||||| || ||||| ||||||||||| Sbjct 1440993 CGAAATCCAGCGCAAGGCCCAGTCAGCCTTCTT 1440961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108462734720