Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq44 105 4e-17 seq8 98.7 6e-15 >seq44 Length=1723839 Score = 105 bits (116), Expect = 4e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || |||||||| || |||||| || || || || | || ||| Sbjct 1003465 ACGGAGACGAAGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGT 1003406 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||||||| ||||||||||| || || | ||| || || ||||| ||||| || Sbjct 1003405 GCGGCCATCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTGGAATGCC 1003346 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 || ||||||||||||||| || || || || || || | | | | || | Sbjct 1003345 CTCTTTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTCCA-CCTCGA 1003287 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| ||||| || || ||||| ||||| |||||||| || Sbjct 1003286 GGGTGATAGTCTTGCCAGTGAGGGTCTTGACGAAAATCTG 1003247 Score = 102 bits (112), Expect = 5e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| ||||| || |||||| || || || || | || ||| Sbjct 1003693 ACGGAGACGGAGGACAAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGT 1003634 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||||||| ||||| ||||| || || | ||| || || || || ||||| || Sbjct 1003633 GCGGCCATCTTCAAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCC 1003574 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||| |||||||||||| || || || || ||||| | || | | | ||| Sbjct 1003573 CTCCTTATCTTGAATCTTTGACTTCACGTTGTCGATGGTATCTGATGATTCGACCTCCAA 1003514 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || |||||||||||||| || || Sbjct 1003513 -TGTGATGGTCTTTCCAGTAAGAGTCTTAACGAAGATCTG 1003475 >seq8 Length=655220 Score = 98.7 bits (108), Expect = 6e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 321737 GAGATATTCAATATTATGTTCCGTAACAATTTCATCAAATGTAAGATTTTTTGCAATAAT 321796 |||| | |||||||| | | |||||||| ||| | | |||||| | | || || | Sbjct 190467 GAGAAACTCAATATTGTATGGCGTAACAACTTCCGGATAGGTAAGAATCATGGCGGTACT 190526 Query 321797 TAATGGTAAACCAACTTCATTCAGTGCAATATTTGGATCAGATGTGATAACTGTACGACC 321856 | ||||| ||||||||||| || | | || || ||| ||||| || |||||| | Sbjct 190527 TCGTGGTACACCAACTTCATCCAAAGACAAGTTGGGGTCACCAGTGATGACAGTACGAGC 190586 Query 321857 AGACATATCAACACGTTTACCCATAAGATTTCCTCTAATACGACCTTCTTTTCC 321910 || | |||||||||||||||||| | ||| | || ||||||||||||||| Sbjct 190587 CGAGAAATCAACACGTTTACCCATCAAGTTTTGGCGAAGACGACCTTCTTTTCC 190640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268177141047104