Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq44 98.7 2e-15
>seq44
Length=1723839
Score = 98.7 bits (108), Expect = 2e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902
||||| | |||||| | || || || | ||| | ||| || || || ||||| ||
Sbjct 1003926 CCACCCCGAAGTCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGAC 1003867
Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962
| || || | || || || || ||||||||||| || | || ||| ||||| || ||
Sbjct 1003866 AGAGTGCGGCCATCTTCTAACTGCTTACCAGCAAAGATCAGTCGCTGCTGGTCTGGAGGA 1003807
Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022
|| ||||||||||| || || || || || ||| || || ||||| ||||| ||
Sbjct 1003806 ATGCCTTCTTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCTGAAGATTCGACC 1003747
Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| | || || || || ||||| | || |||| ||| ||||||||
Sbjct 1003746 TCCAATGTGATCGTCTTGCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003700
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || | || | ||| | ||| | ||||| ||| || || ||
Sbjct 1003473 ATACCACCACGGAGACGAAGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCG 1003414
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||||| || | || || | || || ||||| || || || | ||| |||||||||
Sbjct 1003413 GATAAAGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGT 1003354
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| ||||| || || || || || || || ||||| || ||
Sbjct 1003353 GGAATGCCCTCTTTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTCC 1003294
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || || || || ||||| | || || | ||| ||||||||
Sbjct 1003293 ACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1003244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135456918400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |