Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq44 98.7 2e-15 >seq44 Length=1723839 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| | |||||| | || || || | ||| | ||| || || || ||||| || Sbjct 1003926 CCACCCCGAAGTCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGAC 1003867 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | || || | || || || || ||||||||||| || | || ||| ||||| || || Sbjct 1003866 AGAGTGCGGCCATCTTCTAACTGCTTACCAGCAAAGATCAGTCGCTGCTGGTCTGGAGGA 1003807 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || ||||||||||| || || || || || ||| || || ||||| ||||| || Sbjct 1003806 ATGCCTTCTTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCTGAAGATTCGACC 1003747 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || | || || || || ||||| | || |||| ||| |||||||| Sbjct 1003746 TCCAATGTGATCGTCTTGCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003700 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || | || | ||| | ||| | ||||| ||| || || || Sbjct 1003473 ATACCACCACGGAGACGAAGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCG 1003414 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | || || | || || ||||| || || || | ||| ||||||||| Sbjct 1003413 GATAAAGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGT 1003354 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||| || || || || || || || ||||| || || Sbjct 1003353 GGAATGCCCTCTTTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTCC 1003294 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || || || || ||||| | || || | ||| |||||||| Sbjct 1003293 ACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1003244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135456918400