Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq46 143 8e-29 seq35 96.9 1e-14 seq8 95.1 4e-14 seq47 84.2 6e-11 >seq46 Length=1567519 Score = 143 bits (158), Expect = 8e-29 Identities = 563/880 (64%), Gaps = 9/880 (1%) Strand=Plus/Plus Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685 ||| |||||| | |||||| || ||||||||||| || ||||| | |||||| | Sbjct 836440 CGCAGTATTCGATAATCTCGGTACAGAGGTTAGAACTGCGAATAGTGCCAAGATTCTTTT 836499 Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745 |||| || |||| |||||||||||||| || ||| | || | || ||||| ||| Sbjct 836500 GGTTGCTCTTCTTGTTGCAAGCATCCTTGTAAAGCATGAAAGGATTACCAGTCTCAGTCT 836559 Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTT 155805 | || || || || |||||| | |||| || | | | | |||| Sbjct 836560 GAGCCTCGAGGATGGCATACCAGAGTTTCTGGGCCTTCACAGTACGGCGGCCGCGACCTT 836619 Query 155806 CCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865 || || |||||| ||| || | | | || |||||||| ||| || || | Sbjct 836620 CCTTTTCGTATTTCTCATAAAGAGCATCGAACTCTTCACCGTAGACATCGGCAAGACCTG 836679 Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925 || | || || || ||||| | ||| || || | ||||| ||| || | Sbjct 836680 GGGCTTCATTTGGACAGAACAGAGTCCAGTCCTTGTTCGCCTCCACACGGCGCATGAAAA 836739 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGCCGTGA 155984 ||| | ||| | ||| |||||||| || | || |||| || | | || || Sbjct 836740 GGTCAGGAGTCCACAAAGCGTAGAAAAGATCACGGGCACG-GACTTCTTCTTTTCCATGG 836798 Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044 ||||| || || || | ||| || | ||| | || |||||||| || |||||| Sbjct 836799 TTCTTACGAAGGTCGAGGAACTCAAAGACATCTGAGTGCCACGGCTCCAGGTAGATAGCA 836858 Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101 || |||| | ||| || || || || || |||| ||| || || |||||||| Sbjct 836859 AATGCACCAGGGCGTTTGTTACCTCCTTGGTCAACGTACCTAGCGGTGTTGTTGAAGACT 836918 Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161 | |||||||||| | ||| || ||||||||||| ||||| | ||| | ||||||| Sbjct 836919 CTGAGCATAGGAACGAGACCGTTTGAAGTGCCATTCGTTCCTCCAATGTAGGAACCAGTA 836978 Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT--TTAGAAATTTGAGCGC 156219 | |||| | |||| || || || |||||||| | ||| || || || ||| | Sbjct 836979 GCACGAATACGGTGAACATTAAGACCGATACCACC--AGCATTCTTGGAGATCATAGCAC 837036 Query 156220 ATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGC 156279 || ||| | |||| |||| || |||||| |||||| | ||| | || | | Sbjct 837037 ATGTCTTAAGCGTATCATAAATGCCGTCAATACTATCATCCTTCATATCCACAAGGAAAC 837096 Query 156280 ACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAA 156339 | || | || ||| | || || ||||| |||| | || || | || || | | Sbjct 837097 AGGAGGCGAGCTGTGGTTGAGGCGTGCCAGCACTGAACAAAGTCGGGGACGCGTGTGTGA 837156 Query 156340 AATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAA 156399 | || || | |||||| || ||||||||| | ||| |||| ||| ||||| | Sbjct 837157 AGTATTTCTGAGACATCAGATTGTATGTCTCGATGGCCTTTTCAATATTGTCACCGTGGA 837216 Query 156400 TACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTC 156459 ||| | || || | ||| | || ||||||||||| ||||| |||| || | Sbjct 837217 TACCAACAGCAACACGCATGATTAGGTGTTGAGGACGCTCAGCAATCTTGCCATTAAGCC 837276 Query 156460 GCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 | || | || | ||| || ||||| || || || ||||| Sbjct 837277 GGAGCAAATAAGAGCGCTCAAGAGTCTTGAATCCAAAATA 837316 >seq35 Length=1739444 Score = 96.9 bits (106), Expect = 1e-14 Identities = 144/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 289026 TTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085 |||||||| |||||| ||||| ||||||||||| | || || | || | || ||| | Sbjct 1017481 TTTACCAATAGCATCGATTTCATCAATGAAAATAATGCAGGGGGTGTTCTTTCGGGCATT 1017422 Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 ||||| || || | ||||| || | || | ||||||| ||||||| ||||| ||||| Sbjct 1017421 GGCAAACAAATCACGGACACGAGAAGGACCGACACCAACAAACATTTCAACAAACTCAGA 1017362 Query 289146 AGCGGATAC-TTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | || |||| || | ||| | ||| ||||| |||| |||| || | || Sbjct 1017361 TCCACTGACGCTGAA-AAACGGTACCCCGGATTCACCTGCGGTTGCCTTCGCGAGCAATG 1017303 Query 289205 TCTTACCTGTTCCAGGTGGTCC 289226 ||||||||||||| || || || Sbjct 1017302 TCTTACCTGTTCCTGGCGGACC 1017281 >seq8 Length=655220 Score = 95.1 bits (104), Expect = 4e-14 Identities = 106/141 (75%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 || ||| |||| | ||| ||||||||| | |||||||| |||||| ||||||||| Sbjct 188304 CAAAATCTCTTTCAAACGAGGAACACCAAGAGTTACGTT---CTTGGAGCTAACACCAGC 188360 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 ||||||||| || |||| || | || || | ||||| |||||| ||| || || | Sbjct 188361 AAAGTGGAAGGTGTTCAAGGTCATCTGTGTGGCAGGCTCCCCAATAGATTGAGCAGCCAA 188420 Query 301932 CATACCAACCATTTCTCCTGG 301952 || |||||||||||| || || Sbjct 188421 CACACCAACCATTTCACCCGG 188441 Score = 91.5 bits (100), Expect = 4e-13 Identities = 169/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655 |||||||| |||||||| || || || || || || || || ||||| | |||||| Sbjct 189103 CGCTGAATGTAACCAGTCTCAGCAGTCTTAACTGCAGTGTCGATAAGACCTTCTCGACCA 189162 Query 302656 CCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACG 302715 ||||||| |||||||| | || ||| | || | || | || |||||||| Sbjct 189163 GCCATAGCGTGGAAGAAAAATTCGGTAGGTGTCAAACCACGAAGGTAAGAATTCTCAACG 189222 Query 302716 AAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCA 302775 ||||| | | ||| || |||| |||| ||||||||| || || || || | | | Sbjct 189223 AAACCTCTAGACTCTGGAGAATAGTCGTCCTTGGTAAAATGGGGAAGTGTGCGATATTTG 189282 Query 302776 TAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGC 302835 | || | || ||||||||||| |||||| || ||||| | | |||||||| Sbjct 189283 AATCCAAAAGGAATACGCTTTCCTTCAACGGATTGTTGTCCAACAATGGCTGTCATCTGC 189342 Query 302836 GAAATATT 302843 || ||||| Sbjct 189343 GAGATATT 189350 Score = 87.8 bits (96), Expect = 5e-12 Identities = 120/167 (72%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 303616 GATTCTTCATCTTGGGGCATATGTAAATTCATCTCATCACCGTCAAAATCAGCATTATAC 303675 |||||||| || || | ||| || |||||||| |||||||||||||| ||||| || Sbjct 190144 GATTCTTCGCTCTGAGGGACATGCAAGTTCATCTCGTCACCGTCAAAATCGGCATTGTAA 190203 Query 303676 GGCTTTGTGTCCGCAACGTTCATCCGGAAAGTATCACCCTGCATCATAACACGGGCTTTA 303735 || ||||| ||| | ||| | ||||||||| | | ||| || || | | Sbjct 190204 GGAGTTGTGACCGACAAGTTAAGACGGAAAGTAGAA---TAAGGCATGACCCGTACACGA 190260 Query 303736 TGACACATCATAGACATTCTGTGTAGAGTTGGCTGACGATTGAAAAG 303782 |||| |||||||||| | |||| || | |||||||| |||||||| Sbjct 190261 TGACCCATCATAGACTCTTTGTGAAGCGACGGCTGACGGTTGAAAAG 190307 >seq47 Length=1506266 Score = 84.2 bits (92), Expect = 6e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 ||||||||| | |||||||||||| || ||||| || |||||||| |||||||||||||| Sbjct 681985 TGCACCGTGCGCAATCATACAATCGCGTTCCATCTCTCCGAAACGTAGACCACCATCGCG 681926 Query 251544 AGCCCTACCCTCGGCAGGCTG 251564 || | ||| || |||| || Sbjct 681925 GGCACGACCTTCTACAGGTTG 681905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816694832176