Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq44 100 3e-16 >seq44 Length=1723839 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || || || || || | || || ||| | | Sbjct 1003700 ATGCAGATCTTCGTTAAGACTCTTACTGGCAAGACGATCACATTGGAGGTCGAATCTTCA 1003759 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || |||||||| || ||||| || || Sbjct 1003760 GACACCATCGATAACGTCAAGTCCAAGATTCAGGATAAAGAAGGCATTCCTCCAGACCAG 1003819 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||| || || ||| | || ||| | | |||| ||||| ||| Sbjct 1003820 CAGCGACTGATCTTTGCTGGTAAGCAGTTAGAAGATGGCCGCACTCTGTCTGATTACAAC 1003879 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||||||||| | ||| | || || ||| Sbjct 1003880 ATCCAGAAGGAGTCCACTCTTCACTTGGTGCTCCGACTTCGGGGTGGC 1003927 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || || ||||| || ||||| || || | | Sbjct 1003244 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCA 1003303 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| ||||||||||| || || || || || || Sbjct 1003304 GACACCATCGACAACGTGAAGTCAAAGATTCAAGACAAAGAGGGCATTCCACCTGACCAG 1003363 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| || || || ||||| || ||| | | | || || || ||| Sbjct 1003364 CAGCGTTTGATCTTCGCTGGAAAGCAGCTTGAAGATGGCCGCACTTTATCCGACTACAAC 1003423 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| || ||||| || || || Sbjct 1003424 ATTCAGAAAGAATCCACTCTTCA 1003446 Score = 86.0 bits (94), Expect = 6e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || ||||| || || | | Sbjct 1002957 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACTATCACCCTCGAGGTGGAGTCTTCT 1003016 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| |||||||| || || || || || || Sbjct 1003017 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCACCTGACCAG 1003076 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| || || || || || |||||| | | | | || || || ||| Sbjct 1003077 CAGCGTTTGATCTTCGCTGGAAAGCAACTCGAGGATGGCCGCACCCTCTCTGACTACAAC 1003136 Query 24884 ATTCA 24888 ||||| Sbjct 1003137 ATTCA 1003141 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || || || || || | || || ||| | | Sbjct 1003472 ATGCAGATCTTCGTTAAGACTCTTACTGGAAAGACCATCACATTGGAGGTCGAATCATCA 1003531 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||| ||||| || || || || || ||||| || Sbjct 1003532 GATACCATCGACAACGTGAAGTCAAAGATTCAAGATAAGGAGGGCATTCCCCCCGACCAG 1003591 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| || || || ||||| || ||| | | | || || || ||| Sbjct 1003592 CAGCGTTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGCCGCACTTTATCCGACTACAAC 1003651 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| || ||||| || || ||| Sbjct 1003652 ATTCAGAAAGAATCCACGCTTCAC 1003675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897330061440