Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq44 120 2e-22 seq45 107 1e-18 seq35 98.7 6e-16 >seq44 Length=1723839 Score = 120 bits (132), Expect = 2e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 34792 CTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAG 34851 ||||||||| ||||| || ||| |||| |||| || ||||||||||| |||||||||| Sbjct 1003142 CTGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATCAA 1003083 Query 34852 TCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTAT 34911 || |||||||| | || | ||||| ||||| | || || |||||| | || Sbjct 1003082 ACGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGAT 1003023 Query 34912 CGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGAT 34971 | ||| | ||| || || | ||| || ||||| || ||||||||||| || ||||| Sbjct 1003022 GGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACGAAGAT 1002963 Query 34972 CTGCATGAT 34980 ||||||||| Sbjct 1002962 CTGCATGAT 1002954 Score = 113 bits (124), Expect = 3e-20 Identities = 156/217 (72%), Gaps = 10/217 (5%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| || ||||||||||| ||||| |||| |||| |||| Sbjct 1003683 AGGACAAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCT 1003624 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||||| || |||||||| | || | |||||||| || Sbjct 1003623 TCAAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCT 1003564 Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 | || ||| || ||| |||| |||| | || | ||||| || | || | Sbjct 1003563 TGAATCTTTGACTTCACGTTGTCGATGGTATC---TGAT--GATTCGACCTCCAATGTGA 1003509 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||||| || || ||||| || ||||||||||| Sbjct 1003508 TGGTCTTTCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003472 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| ||| || ||||||||||| ||||| |||| |||| |||| Sbjct 1003455 AGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCT 1003396 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| |||||||||| || |||||||| | || | ||||| ||||| Sbjct 1003395 TCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCT 1003336 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| || ||| | || | || | ||| || || | ||| || ||| Sbjct 1003335 TGAATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGTC 1003276 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || || |||||||| Sbjct 1003275 TTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1003244 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||||||||| ||||| || || || || |||| |||| Sbjct 1003911 AGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTGCGGCCATCT 1003852 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || | ||||| || || ||||||||||| ||||||||| | || | || || || || Sbjct 1003851 TCTAACTGCTTACCAGCAAAGATCAGTCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCC 1003792 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| | ||||||| || | ||||| || | || || Sbjct 1003791 TGAATCTTGGACTTGAC----GTTATCGATGGTGTCTGAAGATTCGACCTCCAATGTGAT 1003736 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || || ||||| || ||||||||||| Sbjct 1003735 CGTCTTGCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003700 >seq45 Length=1577698 Score = 107 bits (118), Expect = 1e-18 Identities = 136/185 (74%), Gaps = 8/185 (4%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || | || |||| || || |||||||||||||||| Sbjct 1410093 CCTTCTGGATGTTGTAGTCGCTAAGAGTACGGCCATCTTCAAGCTGCTTTCCGGCGAAGA 1410034 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| || |||||||| | || | ||||||||||| | || || ||||| || Sbjct 1410033 TCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 1409977 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || || |||||| |||| ||| |||||||| |||||||||||||| Sbjct 1409976 -TGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 1409918 Query 34964 ACAAA 34968 || || Sbjct 1409917 ACGAA 1409913 >seq35 Length=1739444 Score = 98.7 bits (108), Expect = 6e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||||||||| ||||| ||||| || || |||| | || Sbjct 526072 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCC 526013 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| |||||||||||||| ||||||||||| | || | ||||||||||| Sbjct 526012 TCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGGATACCCTCCTTGTC 525954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692609469712