Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq44 123 2e-23 >seq44 Length=1723839 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | |||||| ||||||||||| |||||||| || || | | ||||| Sbjct 1003459 ACGAAGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCC 1003400 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || ||||| | ||||| | ||||| || || ||||| |||||||| Sbjct 1003399 ATCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTT 1003340 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| |||| || || | || | ||||| ||| || || || || || | Sbjct 1003339 GTCTTG-AATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGA 1003281 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| |||||||| | ||| || || || |||||||| Sbjct 1003280 TAGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1003244 Score = 100 bits (110), Expect = 2e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 29602 TGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAAT 29661 |||||||| || || | | |||||| ||| |||||||| || ||||| | ||||| Sbjct 1003141 TGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATCAAA 1003082 Query 29662 CTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACA 29721 | ||||| || || ||||| ||||||||||| || | || ||||| | || | Sbjct 1003081 CGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATG 1003022 Query 29722 GTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATC 29781 ||||||||| || || || || || ||||| ||||| || | ||| || || || ||| Sbjct 1003021 GTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACGAAGATC 1002962 Query 29782 TGCAT 29786 ||||| Sbjct 1002961 TGCAT 1002957 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||||||||||||||| |||||||| || || | | ||||| Sbjct 1003687 ACGGAGGACAAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCC 1003628 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || ||||| | ||||| | ||||| || || ||||| ||||| || Sbjct 1003627 ATCTTCAAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTT 1003568 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| ||| |||| || || | || | || || || ||| || || | || | Sbjct 1003567 ATCTTG-AATCTTTGACTTCACGTTGTCGATGGTATCTGATGATTCGACCTCCAATGTGA 1003509 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| | || ||||| || |||||||| Sbjct 1003508 TGGTCTTTCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218974646768