Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq44 123 2e-23
>seq44
Length=1723839
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | |||||| ||||||||||| |||||||| || || | | |||||
Sbjct 1003459 ACGAAGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCC 1003400
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || ||||| | ||||| | ||||| || || ||||| ||||||||
Sbjct 1003399 ATCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTT 1003340
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| ||| |||| || || | || | ||||| ||| || || || || || |
Sbjct 1003339 GTCTTG-AATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGA 1003281
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||| |||||||| | ||| || || || ||||||||
Sbjct 1003280 TAGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1003244
Score = 100 bits (110), Expect = 2e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 29602 TGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAAT 29661
|||||||| || || | | |||||| ||| |||||||| || ||||| | |||||
Sbjct 1003141 TGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATCAAA 1003082
Query 29662 CTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACA 29721
| ||||| || || ||||| ||||||||||| || | || ||||| | || |
Sbjct 1003081 CGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATG 1003022
Query 29722 GTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATC 29781
||||||||| || || || || || ||||| ||||| || | ||| || || || |||
Sbjct 1003021 GTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACGAAGATC 1002962
Query 29782 TGCAT 29786
|||||
Sbjct 1002961 TGCAT 1002957
Score = 96.9 bits (106), Expect = 3e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||||||||||||||||| |||||||| || || | | |||||
Sbjct 1003687 ACGGAGGACAAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCC 1003628
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || ||||| | ||||| | ||||| || || ||||| ||||| ||
Sbjct 1003627 ATCTTCAAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTT 1003568
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||||| ||| |||| || || | || | || || || ||| || || | || |
Sbjct 1003567 ATCTTG-AATCTTTGACTTCACGTTGTCGATGGTATCTGATGATTCGACCTCCAATGTGA 1003509
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || ||||| | || ||||| || ||||||||
Sbjct 1003508 TGGTCTTTCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218974646768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |