Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq44 149 1e-30 >seq44 Length=1723839 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || ||||| ||||| || || ||||| || || |||||||| ||| | | || Sbjct 1003914 CGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTGCGGCCA 1003855 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||||| || || ||||||||||| |||| || || |||||||| || ||||| ||| Sbjct 1003854 TCTTCTAACTGCTTACCAGCAAAGATCAGTCGCTGCTGGTCTGGAGGAATGCCTTCTTTA 1003795 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| | || || || || || || || || ||| || ||||| || ||| Sbjct 1003794 TCCTGAATCTTGGACTTGACGTTATCGATGGTGTCTGAAGATTCGACCTCCAATGTGATC 1003735 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | ||||| || || |||||||| Sbjct 1003734 GTCTTGCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003700 Score = 120 bits (132), Expect = 6e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| || || ||||||||||| || || || || | Sbjct 1003700 TACCACCACGGAGACGGAGGACAAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGG 1003641 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | | || ||||| || || || ||||| ||||| | | || || || || | Sbjct 1003640 ATAAAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGG 1003581 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||||||||||| || || || || || ||||| | ||| | Sbjct 1003580 GAATGCCCTCCTTATCTTGAATCTTTGACTTCACGTTGTCGATGGTATCTGATGATTCGA 1003521 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || ||||| || || | ||||| || || |||||||| Sbjct 1003520 CCTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003472 Score = 107 bits (118), Expect = 4e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| ||||||||||| || || || || | Sbjct 1003472 TACCACCACGGAGACGAAGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCGG 1003413 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | | || ||||| || || |||||||| ||||| | | || || || || | Sbjct 1003412 ATAAAGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTG 1003353 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || || ||||||||||||| || || || || || || || || || | Sbjct 1003352 GAATGCCCTCTTTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTCCA 1003293 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || |||||||| || | ||||| || || |||||||| Sbjct 1003292 CCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1003244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826596176272