Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq44 102 8e-17 seq45 95.1 1e-14 >seq44 Length=1723839 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| || ||||| ||| | ||| | | | || || |||||||| || Sbjct 1003440 GTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCA-TCTTCAAGCTGCTTTCC 1003382 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || || ||||| || ||||| |||||| ||| Sbjct 1003381 AGCGAAGATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCTTGAATCTTTGACTT 1003322 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| | | |||||| |||| ||||| || ||||| || || || Sbjct 1003321 CACGTTGTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGT 1003262 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 1003261 CTTGACGAAAATCTGCAT 1003244 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||| ||||| || ||| | || | ||||||||||| || || ||||| || ||| Sbjct 1003111 TCCTCGAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTTG 1003052 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | | |||||| |||| ||||| Sbjct 1003051 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATA 1002992 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || || || || ||||| ||||||||| Sbjct 1002991 GTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCATG 1002956 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || |||||||| || ||| | | | || || | |||||| || Sbjct 1003896 GTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTGCGGCCA-TCTTCTAACTGCTTACC 1003838 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| ||||| |||||||| || || ||||| ||| Sbjct 1003837 AGCAAAGATCAGTCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCCTGAATCTTGGACTT 1003778 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | || || || | |||| || ||||| || ||||| Sbjct 1003777 GACGTTATCGATGGTGTCTGAAGATTCGACCTCCAATGTGATCGTCTTGCCAGTAAGAGT 1003718 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 1003717 CTTAACGAAGATCTGCAT 1003700 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| || ||||| ||| | ||| | | | || || |||||||| || Sbjct 1003668 GTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCA-TCTTCAAGCTGCTTACC 1003610 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | |||||||||||||| || ||||| ||||| || |||||| ||| Sbjct 1003609 AGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCTTGAATCTTTGACTT 1003550 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || || | | || || || | |||| ||| || || || ||||| Sbjct 1003549 CACGTTGTCGATGGTATCTGATGATTCGACCTCCAATGTGATGGTCTTTCCAGTAAGAGT 1003490 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 1003489 CTTAACGAAGATCTGCAT 1003472 >seq45 Length=1577698 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || |||||||| || ||| | || || ||||||||||| || ||||| || |||||| Sbjct 1410058 TCTTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTG 1409999 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||||| || ||| || || | ||||| | Sbjct 1409998 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATG 1409939 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| || || || || |||||| Sbjct 1409938 GTCTTGCCCGTGAGGGTCTTGACGAAA 1409912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420509947520