Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 seq47 89.7 4e-13 >seq1 Length=3269259 Score = 127 bits (140), Expect = 2e-24 Identities = 339/517 (66%), Gaps = 11/517 (2%) Strand=Plus/Plus Query 19272 AATCTTTCGTAGAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGG 19331 ||| |||||| |||| |||| |||||| | || | | | | | || || ||||||| Sbjct 1527593 AATTTTTCGTCGAGCCTTTGCGTCGCGGATCTTCCCGCCTGGTTTAATCAACAAATTGGG 1527652 Query 19332 ATGTAAA-CATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAA 19390 | || | |||||| || || | || ||||| || || ||||| ||||||| Sbjct 1527653 -TATACAGCATGTTAAGGGTATTCTTCTATATGGAGTTCCCGGAACAGGAAAGACATTAA 1527711 Query 19391 TTGCGAGAGAACTTAGTAAATTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTG 19450 |||| | | || ||||| | || | | | ||||| || | || ||||| | Sbjct 1527712 TTGCCCGGCAGATTGGTAAAATGCTGAATGCTCGAGAACCCAAGATCATCAACGGTCCAG 1527771 Query 19451 AAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACG 19510 || | | ||||||||||| || || || ||||||||| | ||| ||||||| || | Sbjct 1527772 AAGTGCTTAATAAATATGTCGGCCAGTCAGAAGAAAATATTCGAAAAATGTTTGCCGATG 1527831 Query 19511 CTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATG 19570 ||||| | ||| | || ||| | | ||| | ||||| || || || | || | Sbjct 1527832 CTGAAAAGGAATACAAGGAGAAAGGAGACGAGAGTGCGTTGCATATCATCATTTTTGACG 1527891 Query 19571 AATTGGACGCAATCTGTAAGCA---------AAGAGGTTCTGGTGTAAATGGAGTACATG 19621 || | || || |||| || || ||| | ||||| | ||| || || Sbjct 1527892 AACTTGATGCCGTCTGCAAACAGCGTGGCAGCGGAGCTGGTGGTGGCACTGGTGTTGGTG 1527951 Query 19622 ACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTT 19681 | | || ||||||||| | || || ||| | ||||| ||| |||| || || |||||| Sbjct 1527952 ATAGCGTCGTCAATCAATTGCTTTCGAAACTTGACGGAGTTGACCAGCTCAACAATATTC 1528011 Query 19682 TAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTC 19741 | | ||||| ||||| ||||| ||| | || ||| ||||| || ||||| |||| Sbjct 1528012 TCTTGATTGGTATGACGAATAGGAAGGACATGATCGACGATGCCTTGTTGCGACCTGGTC 1528071 Query 19742 GGTTGGAAATAAAGATCGAAATTAACTTACCCGATGA 19778 | |||||| | | || ||||| ||| || ||||| Sbjct 1528072 GTTTGGAAGTTCACATGGAAATCGGCTTGCCAGATGA 1528108 Score = 120 bits (132), Expect = 2e-22 Identities = 266/397 (67%), Gaps = 13/397 (3%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 |||||| | |||||||||| || | |||| |||||||| || || ||||| || ||| Sbjct 18648 CCCAAAGTCATAAATGGTCCCGAGGTTCTAAACAAATATGTCGGACAGTCGGAGGAGAAT 18589 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCT 19548 | || | |||||||| || || |||| | ||| | |||||| || ||| | Sbjct 18588 ATCAGAAAGCTTTTTGCTGATGCAGAGAAAGAGTATAAA-GAAAAGGGCG-AAGAGTCCG 18531 Query 19549 T--TGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTG 19606 | || ||||| || | ||||| ||||| || | ||||| |||||||| || || | Sbjct 18530 GACTCCATATTATCATCTTCGATGAGTTGGATGCCGTGTGTAAACAAAGAGGATCAGGGG 18471 Query 19607 TA---------AATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACG 19657 | ||| || || | ||||||||||||||| || || ||| | || | Sbjct 18470 CCGGAGGGGGCACTGGTGTGGGAGATAGTGTTGTCAATCAACTTCTATCCAAACTCGATG 18411 Query 19658 GTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAG 19717 |||| ||||||||||||| ||| || | ||||| ||||| || | ||| | || | Sbjct 18410 GTGTGGACCAACTGAATAACATTCTACTCATTGGAATGACAAACCGTAAGGACATGATCG 18351 Query 19718 ACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATG 19777 || || | || || ||||| || | || | |||| || || | ||||| || | Sbjct 18350 ACGATGCGCTCTTGCGTCCCGGGCGTCTAGAGGTGCAGATTGAGATCAGTTTACCAGACG 18291 Query 19778 AATGTGGACGTGTGGAAATTTTAAACATACATACATC 19814 | |||||||| | | ||||| | || ||||| || Sbjct 18290 AGCGTGGACGTCTCCAGATTTTGCAGATTCATACGTC 18254 >seq47 Length=1506266 Score = 89.7 bits (98), Expect = 4e-13 Identities = 130/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 115031 AATGGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTC 115090 ||| |||||||| || |||| ||||| ||||| ||||||| |||||||| | || || Sbjct 681625 AATCGTCATACGAGATGGAATGGCATGGGGATTGATAATCAGATCTGGCACGACACCTTC 681566 Query 115091 GGCTGTGAACGGCATGTCGTGCTGATCGTACATCATTCCACAAGTTCCTTTTTGAGCGGT 115150 ||||||||||| || | ||| |||| || ||| || || |||||| || Sbjct 681565 TCGAGTGAACGGCATATCTTCGTGACGATACACGATACCAATCGTACCCTTTTGACCGTG 681506 Query 115151 AAACGATGCAAATTTATCACCAATCT-CAGGTTCTCTGATTTTTCTCAGACGTATCTTCA 115209 | || |||||||| |||||||||| | || ||| || || ||| || ||| | ||| | Sbjct 681505 ACGTGACGCAAATTTGTCACCAATCTGCGGGATCTTTG-TTGTTCGCATACGGACCTTGA 681447 Query 115210 C 115210 | Sbjct 681446 C 681446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455767488240