Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 2e-24
seq47 89.7 4e-13
>seq1
Length=3269259
Score = 127 bits (140), Expect = 2e-24
Identities = 339/517 (66%), Gaps = 11/517 (2%)
Strand=Plus/Plus
Query 19272 AATCTTTCGTAGAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGG 19331
||| |||||| |||| |||| |||||| | || | | | | | || || |||||||
Sbjct 1527593 AATTTTTCGTCGAGCCTTTGCGTCGCGGATCTTCCCGCCTGGTTTAATCAACAAATTGGG 1527652
Query 19332 ATGTAAA-CATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAA 19390
| || | |||||| || || | || ||||| || || ||||| |||||||
Sbjct 1527653 -TATACAGCATGTTAAGGGTATTCTTCTATATGGAGTTCCCGGAACAGGAAAGACATTAA 1527711
Query 19391 TTGCGAGAGAACTTAGTAAATTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTG 19450
|||| | | || ||||| | || | | | ||||| || | || ||||| |
Sbjct 1527712 TTGCCCGGCAGATTGGTAAAATGCTGAATGCTCGAGAACCCAAGATCATCAACGGTCCAG 1527771
Query 19451 AAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACG 19510
|| | | ||||||||||| || || || ||||||||| | ||| ||||||| || |
Sbjct 1527772 AAGTGCTTAATAAATATGTCGGCCAGTCAGAAGAAAATATTCGAAAAATGTTTGCCGATG 1527831
Query 19511 CTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATG 19570
||||| | ||| | || ||| | | ||| | ||||| || || || | || |
Sbjct 1527832 CTGAAAAGGAATACAAGGAGAAAGGAGACGAGAGTGCGTTGCATATCATCATTTTTGACG 1527891
Query 19571 AATTGGACGCAATCTGTAAGCA---------AAGAGGTTCTGGTGTAAATGGAGTACATG 19621
|| | || || |||| || || ||| | ||||| | ||| || ||
Sbjct 1527892 AACTTGATGCCGTCTGCAAACAGCGTGGCAGCGGAGCTGGTGGTGGCACTGGTGTTGGTG 1527951
Query 19622 ACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTT 19681
| | || ||||||||| | || || ||| | ||||| ||| |||| || || ||||||
Sbjct 1527952 ATAGCGTCGTCAATCAATTGCTTTCGAAACTTGACGGAGTTGACCAGCTCAACAATATTC 1528011
Query 19682 TAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTC 19741
| | ||||| ||||| ||||| ||| | || ||| ||||| || ||||| ||||
Sbjct 1528012 TCTTGATTGGTATGACGAATAGGAAGGACATGATCGACGATGCCTTGTTGCGACCTGGTC 1528071
Query 19742 GGTTGGAAATAAAGATCGAAATTAACTTACCCGATGA 19778
| |||||| | | || ||||| ||| || |||||
Sbjct 1528072 GTTTGGAAGTTCACATGGAAATCGGCTTGCCAGATGA 1528108
Score = 120 bits (132), Expect = 2e-22
Identities = 266/397 (67%), Gaps = 13/397 (3%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|||||| | |||||||||| || | |||| |||||||| || || ||||| || |||
Sbjct 18648 CCCAAAGTCATAAATGGTCCCGAGGTTCTAAACAAATATGTCGGACAGTCGGAGGAGAAT 18589
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCT 19548
| || | |||||||| || || |||| | ||| | |||||| || ||| |
Sbjct 18588 ATCAGAAAGCTTTTTGCTGATGCAGAGAAAGAGTATAAA-GAAAAGGGCG-AAGAGTCCG 18531
Query 19549 T--TGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTG 19606
| || ||||| || | ||||| ||||| || | ||||| |||||||| || || |
Sbjct 18530 GACTCCATATTATCATCTTCGATGAGTTGGATGCCGTGTGTAAACAAAGAGGATCAGGGG 18471
Query 19607 TA---------AATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACG 19657
| ||| || || | ||||||||||||||| || || ||| | || |
Sbjct 18470 CCGGAGGGGGCACTGGTGTGGGAGATAGTGTTGTCAATCAACTTCTATCCAAACTCGATG 18411
Query 19658 GTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAG 19717
|||| ||||||||||||| ||| || | ||||| ||||| || | ||| | || |
Sbjct 18410 GTGTGGACCAACTGAATAACATTCTACTCATTGGAATGACAAACCGTAAGGACATGATCG 18351
Query 19718 ACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATG 19777
|| || | || || ||||| || | || | |||| || || | ||||| || |
Sbjct 18350 ACGATGCGCTCTTGCGTCCCGGGCGTCTAGAGGTGCAGATTGAGATCAGTTTACCAGACG 18291
Query 19778 AATGTGGACGTGTGGAAATTTTAAACATACATACATC 19814
| |||||||| | | ||||| | || ||||| ||
Sbjct 18290 AGCGTGGACGTCTCCAGATTTTGCAGATTCATACGTC 18254
>seq47
Length=1506266
Score = 89.7 bits (98), Expect = 4e-13
Identities = 130/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 115031 AATGGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTC 115090
||| |||||||| || |||| ||||| ||||| ||||||| |||||||| | || ||
Sbjct 681625 AATCGTCATACGAGATGGAATGGCATGGGGATTGATAATCAGATCTGGCACGACACCTTC 681566
Query 115091 GGCTGTGAACGGCATGTCGTGCTGATCGTACATCATTCCACAAGTTCCTTTTTGAGCGGT 115150
||||||||||| || | ||| |||| || ||| || || |||||| ||
Sbjct 681565 TCGAGTGAACGGCATATCTTCGTGACGATACACGATACCAATCGTACCCTTTTGACCGTG 681506
Query 115151 AAACGATGCAAATTTATCACCAATCT-CAGGTTCTCTGATTTTTCTCAGACGTATCTTCA 115209
| || |||||||| |||||||||| | || ||| || || ||| || ||| | ||| |
Sbjct 681505 ACGTGACGCAAATTTGTCACCAATCTGCGGGATCTTTG-TTGTTCGCATACGGACCTTGA 681447
Query 115210 C 115210
|
Sbjct 681446 C 681446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455767488240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |