Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq44 156 1e-32 seq46 143 8e-29 seq8 132 1e-25 seq45 84.2 7e-11 >seq44 Length=1723839 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || ||||||||||| || ||||| ||||| || || || Sbjct 1003474 CATACCACCACGGAGACGAAGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTC 1003415 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||||| || || ||||||||||| || |||||||| ||||| | ||| ||||| ||||| Sbjct 1003414 GGATAAAGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGG 1003355 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || ||||| || ||||| || | || || || || || | || || | || Sbjct 1003354 TGGAATGCCCTCTTTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTC 1003295 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| || || || || || || ||||||||||| Sbjct 1003294 CACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1003244 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| ||||| || || ||||| ||||| || || || Sbjct 1003702 CATACCACCACGGAGACGGAGGACAAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTC 1003643 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||||| || || ||||||||||| || || ||||| ||||| | ||| ||||| || || Sbjct 1003642 GGATAAAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGG 1003583 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || ||||| ||||| || | || || || || || | ||| |||| ||| Sbjct 1003582 GGGAATGCCCTCCTTATCTTGAATCTTTGACTTCACGTTGTCGATGGTATCTGATGATTC 1003523 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | ||| | |||||||| || || || || || || |||||||| Sbjct 1003522 GACCTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003472 Score = 143 bits (158), Expect = 8e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 ||||| || | || || || | |||||||| ||||| || || || || |||||||| Sbjct 1003926 CCACCCCGAAGTCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGAC 1003867 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || |||||||| | || || ||||||||||| || || ||||| || |||||| Sbjct 1003866 AGAGTGCGGCCATCTTCTAACTGCTTACCAGCAAAGATCAGTCGCTGCTGGTCTGGAGGA 1003807 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || ||||||||||||||||| || | || || ||||| || | || || | ||| || Sbjct 1003806 ATGCCTTCTTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCTGAAGATTCGACC 1003747 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || | ||| | ||||| || || || || || || || |||||||| Sbjct 1003746 TCCAATGTGATCGTCTTGCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003700 >seq46 Length=1567519 Score = 143 bits (158), Expect = 8e-29 Identities = 455/697 (65%), Gaps = 15/697 (2%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||||| || || || || || ||||| || ||||| || | | | | | |||| | Sbjct 1187262 CCGCTATCGGTATTGACTTGGGAACTACCTACTCTTGCGTGGGTATCTTCCGTGATGACC 1187203 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| ||||| || || || |||||| |||| || || || | |||||| || | Sbjct 1187202 GCATCGAAATCATTGCCAACGACCAGGGTAACCGAACCACCCCCTCGTTCGTTGCTTTCA 1187143 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || || | || || || | | Sbjct 1187142 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCTTACA 1187083 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGAC----AAATCTAC 349431 | || || || || || ||||| || ||||| | ||||| | ||| | || Sbjct 1187082 ACACCGTCTTCGACGCCAAGCGTCTCATTGGCCGCAAGTTCAGC-GACGCTGAGGTC--- 1187027 Query 349432 ACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAAT 349491 || || ||| || || || || || | || || | | ||| | | | || | Sbjct 1187026 -CAGTCCGATGCCAAGCACTTCCCCTTCAAGGTCGT-CGAGAAGGCCACCA--AGCCCGT 1186971 Query 349492 TATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAAT 349551 || ||||| || | || || || || || || ||| || ||||| || || || Sbjct 1186970 CATCGAGGTCGAGTTCAAGGGCGAGACCAAGCAGTTCACACCAGAGGAAATCTCCTCCAT 1186911 Query 349552 GGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGT-AACTGATG 349610 ||| | | || ||| || | || || | || | |||| || || ||| | | Sbjct 1186910 GGTCCTCATCAAGATGCGCGAGACCGCCGAGTCCTACCTTGGTGGCACCGTCAACAGC-G 1186852 Query 349611 CTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTG 349670 |||| || ||||| || ||||| || || || | |||||| || || || ||||||| Sbjct 1186851 CTGTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTG 1186792 Query 349671 GCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTG 349730 | |||||| || | || || || | || || || || || ||||| || || |||| Sbjct 1186791 GTCTCATTGCCGGCCTCAACGTCCTGCGTATCATCAACGAGCCTACTGCCGCCGCTATTG 1186732 Query 349731 CATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTG 349790 | || || | || || | | || || || | || || || ||| | |||| Sbjct 1186731 CCTACGGTTTGGACAAGAAGGCCGAGGGTGAGCGCAACGTGCTCATCTTCGATCTCGGTG 1186672 Query 349791 GTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAA 349850 ||||||| |||||||| || || | || |||| ||||| || || || || || || | Sbjct 1186671 GTGGTACCTTTGATGTCTCCCTCTTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCTA 1186612 Query 349851 CTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 |||||||||| || || | ||||| || || ||||| Sbjct 1186611 CTGCTGGTGACACCCACTTGGGTGGTGAGGACTTTGA 1186575 >seq8 Length=655220 Score = 132 bits (146), Expect = 1e-25 Identities = 198/281 (70%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 378168 GTTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCG 378227 ||||| |||||| ||| ||| | |||||||| || || | ||||| | ||| || Sbjct 189045 GTTTCGAACAGTCCCATCGTATTTGACCATTAATTCCTCGAGAGCTTTGACAAGCTTGCG 189104 Query 378228 AGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACC 378287 ||| |||||||| | | ||| ||||||||||| || || | ||| | |||||| | Sbjct 189105 CTGAATGTAACCAGTCTCAGCAGTCTTAACTGCAGTGTCGATAAGACCTTCTCGACCAGC 189164 Query 378288 CATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAA 378347 ||| || |||||||| ||||| ||||| || | |||| || | ||| |||||| || Sbjct 189165 CATAGCGTGGAAGAAAAATTCGGTAGGTGTCAAACCACGAAGGTAAGAATTCTCAACGAA 189224 Query 378348 TCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAA 378407 ||||| | |||| |||| || | || ||| |||| || | ||| |||| | || Sbjct 189225 ACCTCTAGACTCTGGAGAATAGTCGTCCTTGGTAAAATGGGGAAGTGTGCGATATTTGAA 189284 Query 378408 CCCATATGGAATTCGTTTTCCATCAACATTCTGTTGACCAA 378448 ||| | ||||| || ||||| ||||| ||||| |||| Sbjct 189285 TCCAAAAGGAATACGCTTTCCTTCAACGGATTGTTGTCCAA 189325 >seq45 Length=1577698 Score = 84.2 bits (92), Expect = 7e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 140574 GTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATT 140633 || || ||||||||||| || ||||| || ||||| ||||| ||||| || || || || Sbjct 1410067 GTACGGCCATCTTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATA 1410008 Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 || || || ||||| || || | || ||||| || || | || || | || || ||| Sbjct 1410007 CCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCA 1409948 Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 || || | ||||| || || || || || || ||| Sbjct 1409947 AGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAA 1409912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253468118544