Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq44 161 1e-34 seq45 123 3e-23 seq24 118 1e-21 seq35 89.7 6e-13 >seq44 Length=1723839 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || ||||||||||| || || ||||| ||||| Sbjct 1003244 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCA 1003303 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||| | || ||||| ||||| ||||| ||||| || |||||| Sbjct 1003304 GACACCATCGACAACGTGAAGTCAAAGATTCAAGACAAAGAGGGCATTCCACCTGACCAG 1003363 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || ||||| ||||| || || |||| || || || | ||||| || Sbjct 1003364 CAGCGTTTGATCTTCGCTGGAAAGCAGCTTGAAGATGGCCGCACTTTATCCGACTACAAC 1003423 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || ||||||||||||||||| ||| | ||||| || ||||| Sbjct 1003424 ATTCAGAAAGAATCCACTCTTCATCTCGTCCTTCGTCTCCGTGGTGG 1003470 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| ||||| || ||||| || || | ||||| || ||| Sbjct 1003472 ATGCAGATCTTCGTTAAGACTCTTACTGGAAAGACCATCACATTGGAGGTCGAATCATCA 1003531 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || ||||| | || ||||| || |||||||| ||||| || |||||| Sbjct 1003532 GATACCATCGACAACGTGAAGTCAAAGATTCAAGATAAGGAGGGCATTCCCCCCGACCAG 1003591 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || ||||||||||| || || |||| || || || | ||||| || Sbjct 1003592 CAGCGTTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGCCGCACTTTATCCGACTACAAC 1003651 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || |||||||| ||||| || ||| | ||||| || ||||| Sbjct 1003652 ATTCAGAAAGAATCCACGCTTCACCTTGTCCTCCGTCTCCGTGGTGG 1003698 Score = 143 bits (158), Expect = 3e-29 Identities = 141/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || ||||||||||| || || ||||| ||||| Sbjct 1002954 ATCATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACTATCACCCTCGAGGTGGAGTCT 1003013 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||| | ||| | || | ||| | || || |||||||| ||||| ||||| || ||| Sbjct 1003014 TCTGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCACCTGAC 1003073 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||| | || || ||||| |||||||||||||||| || ||||| | ||||| Sbjct 1003074 CAGCAGCGTTTGATCTTCGCTGGAAAGCAACTCGAGGATGGCCGCACCCTCTCTGACTAC 1003133 Query 27583 AA 27584 || Sbjct 1003134 AA 1003135 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| ||||| |||||||| || || | ||||| || || Sbjct 1003700 ATGCAGATCTTCGTTAAGACTCTTACTGGCAAGACGATCACATTGGAGGTCGAATCTTCA 1003759 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || |||||||| || || || ||||||||||||||| Sbjct 1003760 GACACCATCGATAACGTCAAGTCCAAGATTCAGGATAAAGAAGGCATTCCTCCAGACCAG 1003819 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||||||||| | || |||| || || || | || || || Sbjct 1003820 CAGCGACTGATCTTTGCTGGTAAGCAGTTAGAAGATGGCCGCACTCTGTCTGATTACAAC 1003879 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||||||||| | || | || ||||| ||||| Sbjct 1003880 ATCCAGAAGGAGTCCACTCTTCACTTGGTGCTCCGACTTCGGGGTGG 1003926 >seq45 Length=1577698 Score = 123 bits (136), Expect = 3e-23 Identities = 138/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || |||||||| || || |||||||| ||||| || | ||| Sbjct 1409913 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 1409972 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || |||||||||||||| || || || |||||||||||||| Sbjct 1409973 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTG 1410032 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC-CCTAGCAGACTATAATGTCCAAAA 27593 || || || || ||||| || || |||| ||||| | |||| ||||| || |||| || Sbjct 1410033 ATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGTACTCTTAGC-GACTACAACATCCAGAA 1410091 Query 27594 GG 27595 || Sbjct 1410092 GG 1410093 >seq24 Length=2647559 Score = 118 bits (130), Expect = 1e-21 Identities = 143/194 (74%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719 || |||||||| |||||| | || ||||| | | | || | |||| |||||| Sbjct 1440961 AAGAAGGCTGACTGGGCCTTGCGCTGGATTTCGGACAAGGAATCTACCTTTGCTCAGCGA 1441020 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 |||| || || || || || ||||||||||| || || || ||| ||| |||||| Sbjct 1441021 CTCGTTGCCTTCGCAGCAGTCGAGGGAATTTTCTTCTCCGGTTCCTTCGCTTCGATTTTC 1441080 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || ||||| || |||||||| |||||| | || || ||||||||||| ||||| Sbjct 1441081 TGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCCAACGAGCTGATTTCTCGT 1441140 Query 64840 GACGAGGGGCTCCA 64853 || ||||| || || Sbjct 1441141 GATGAGGGTCTTCA 1441154 >seq35 Length=1739444 Score = 89.7 bits (98), Expect = 6e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || |||||||| ||||| || || || || ||||| |||||| Sbjct 525954 GACAAGGAGGGTATCCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAGCAGCTCGAG 526013 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || || || | ||||| || |||| ||||| ||||| || || | || | Sbjct 526014 GACGGCCGCACTCTTTCTGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTC 526073 Query 27619 CGTCTTCGCGGTGG 27632 ||||| || ||||| Sbjct 526074 CGTCTGCGTGGTGG 526087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310057813760