Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq44 161 1e-34
seq45 123 3e-23
seq24 118 1e-21
seq35 89.7 6e-13
>seq44
Length=1723839
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || || ||||||||||| || || ||||| |||||
Sbjct 1003244 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCA 1003303
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||| | || ||||| ||||| ||||| ||||| || ||||||
Sbjct 1003304 GACACCATCGACAACGTGAAGTCAAAGATTCAAGACAAAGAGGGCATTCCACCTGACCAG 1003363
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || ||||| ||||| || || |||| || || || | ||||| ||
Sbjct 1003364 CAGCGTTTGATCTTCGCTGGAAAGCAGCTTGAAGATGGCCGCACTTTATCCGACTACAAC 1003423
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || || ||||||||||||||||| ||| | ||||| || |||||
Sbjct 1003424 ATTCAGAAAGAATCCACTCTTCATCTCGTCCTTCGTCTCCGTGGTGG 1003470
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| ||||| || ||||| || || | ||||| || |||
Sbjct 1003472 ATGCAGATCTTCGTTAAGACTCTTACTGGAAAGACCATCACATTGGAGGTCGAATCATCA 1003531
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || ||||| | || ||||| || |||||||| ||||| || ||||||
Sbjct 1003532 GATACCATCGACAACGTGAAGTCAAAGATTCAAGATAAGGAGGGCATTCCCCCCGACCAG 1003591
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || ||||||||||| || || |||| || || || | ||||| ||
Sbjct 1003592 CAGCGTTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGCCGCACTTTATCCGACTACAAC 1003651
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || || |||||||| ||||| || ||| | ||||| || |||||
Sbjct 1003652 ATTCAGAAAGAATCCACGCTTCACCTTGTCCTCCGTCTCCGTGGTGG 1003698
Score = 143 bits (158), Expect = 3e-29
Identities = 141/182 (77%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| ||||| |||||||| || || ||||||||||| || || ||||| |||||
Sbjct 1002954 ATCATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACTATCACCCTCGAGGTGGAGTCT 1003013
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
||| | ||| | || | ||| | || || |||||||| ||||| ||||| || |||
Sbjct 1003014 TCTGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCACCTGAC 1003073
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
||||||||| | || || ||||| |||||||||||||||| || ||||| | |||||
Sbjct 1003074 CAGCAGCGTTTGATCTTCGCTGGAAAGCAACTCGAGGATGGCCGCACCCTCTCTGACTAC 1003133
Query 27583 AA 27584
||
Sbjct 1003134 AA 1003135
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| ||||| |||||||| || || | ||||| || ||
Sbjct 1003700 ATGCAGATCTTCGTTAAGACTCTTACTGGCAAGACGATCACATTGGAGGTCGAATCTTCA 1003759
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | || |||||||| || || || |||||||||||||||
Sbjct 1003760 GACACCATCGATAACGTCAAGTCCAAGATTCAGGATAAAGAAGGCATTCCTCCAGACCAG 1003819
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || |||||||||||||| | || |||| || || || | || || ||
Sbjct 1003820 CAGCGACTGATCTTTGCTGGTAAGCAGTTAGAAGATGGCCGCACTCTGTCTGATTACAAC 1003879
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||||||||| | || | || ||||| |||||
Sbjct 1003880 ATCCAGAAGGAGTCCACTCTTCACTTGGTGCTCCGACTTCGGGGTGG 1003926
>seq45
Length=1577698
Score = 123 bits (136), Expect = 3e-23
Identities = 138/182 (76%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || |||||||| || || |||||||| ||||| || | |||
Sbjct 1409913 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 1409972
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || || |||||||||||||| || || || ||||||||||||||
Sbjct 1409973 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTG 1410032
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC-CCTAGCAGACTATAATGTCCAAAA 27593
|| || || || ||||| || || |||| ||||| | |||| ||||| || |||| ||
Sbjct 1410033 ATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGTACTCTTAGC-GACTACAACATCCAGAA 1410091
Query 27594 GG 27595
||
Sbjct 1410092 GG 1410093
>seq24
Length=2647559
Score = 118 bits (130), Expect = 1e-21
Identities = 143/194 (74%), Gaps = 3/194 (2%)
Strand=Plus/Plus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719
|| |||||||| |||||| | || ||||| | | | || | |||| ||||||
Sbjct 1440961 AAGAAGGCTGACTGGGCCTTGCGCTGGATTTCGGACAAGGAATCTACCTTTGCTCAGCGA 1441020
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|||| || || || || || ||||||||||| || || || ||| ||| ||||||
Sbjct 1441021 CTCGTTGCCTTCGCAGCAGTCGAGGGAATTTTCTTCTCCGGTTCCTTCGCTTCGATTTTC 1441080
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||||| || ||||| || |||||||| |||||| | || || ||||||||||| |||||
Sbjct 1441081 TGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCCAACGAGCTGATTTCTCGT 1441140
Query 64840 GACGAGGGGCTCCA 64853
|| ||||| || ||
Sbjct 1441141 GATGAGGGTCTTCA 1441154
>seq35
Length=1739444
Score = 89.7 bits (98), Expect = 6e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| || || || |||||||| ||||| || || || || ||||| ||||||
Sbjct 525954 GACAAGGAGGGTATCCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAGCAGCTCGAG 526013
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | || || || | ||||| || |||| ||||| ||||| || || | || |
Sbjct 526014 GACGGCCGCACTCTTTCTGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTC 526073
Query 27619 CGTCTTCGCGGTGG 27632
||||| || |||||
Sbjct 526074 CGTCTGCGTGGTGG 526087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310057813760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |