Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq44 168 2e-36 seq45 134 3e-26 seq46 95.1 3e-14 seq35 89.7 1e-12 >seq44 Length=1723839 Score = 168 bits (186), Expect = 2e-36 Identities = 170/221 (77%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||||| || || | ||||||||||||||| || |||||||| ||||| | || || Sbjct 1003920 CGAAGTCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTG 1003861 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||||| | |||||| || || ||||| || || || ||||| ||||||| ||| Sbjct 1003860 CGGCCATCTTCTAACTGCTTACCAGCAAAGATCAGTCGCTGCTGGTCTGGAGGAATGCCT 1003801 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || || ||||| ||||| || ||||| ||||||||||| || ||| ||||| | Sbjct 1003800 TCTTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCTGAAGATTCGACCTCCAAT 1003741 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| || || |||||||| || || | |||||| Sbjct 1003740 GTGATCGTCTTGCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003700 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || ||||||||||| ||||| || ||||| || || | | || | |||||| Sbjct 1003455 AGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCT 1003396 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | || || |||||||| |||| || || ||||| Sbjct 1003395 TCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCT 1003336 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||| |||||||| ||||||||||| || || |||||||| ||||| ||| Sbjct 1003335 TGAATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGTC 1003276 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 1003275 TTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1003244 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| ||||| ||||| || ||||| || || | | || | |||||| Sbjct 1003683 AGGACAAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCT 1003624 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | || || ||||| || |||| || ||||| || Sbjct 1003623 TCAAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCT 1003564 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||| |||||||| |||||||| || || ||| ||||| | ||||| ||| Sbjct 1003563 TGAATCTTTGACTTCACGTTGTCGATGGTATCTGATGATTCGACCTCCAATGTGATGGTC 1003504 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || |||||||| || || | |||||| Sbjct 1003503 TTTCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003472 Score = 136 bits (150), Expect = 9e-27 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 210930 TGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGG 210989 || ||||| || || | ||||| | ||||| || || ||||| || |||||||| | Sbjct 1003141 TGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATCAAA 1003082 Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049 || || |||||||| |||| || || |||||||||||||| || ||||| |||||| Sbjct 1003081 CGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATG 1003022 Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109 |||||||| || |||||||| ||||| ||||| || ||||| ||||| || || | | Sbjct 1003021 GTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACGAAGATC 1002962 Query 211110 TGCAT 211114 ||||| Sbjct 1002961 TGCAT 1002957 >seq45 Length=1577698 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||| || | |||||||| |||||||| || |||||||| Sbjct 1410091 TTCTGGATGTTGTAGTCGCTAAGAGTACGGCCATCTTCAAGCTGCTTTCCGGCGAAGATC 1410032 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || ||||| || || | || ||||||||||||||||| || || || ||| Sbjct 1410031 AGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1409972 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| ||| || ||||| || ||||| ||||| |||||||| ||||| || || Sbjct 1409971 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1409913 >seq46 Length=1567519 Score = 95.1 bits (104), Expect = 3e-14 Identities = 196/286 (69%), Gaps = 12/286 (4%) Strand=Plus/Plus Query 178088 CCAAAGTTCTTTTGGTTGC---TCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144 |||| ||||||||||||| |||| ||||| ||||| ||||| ||||| || Sbjct 836487 CCAAGATTCTTTTGGTTGCTCTTCTTGTTGCAA---GCATCCTTGTAAAGCATGAAAGG- 836542 Query 178145 ATTCCCA-CCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGT 178203 ||| ||| ||||| |||||| |||| ||| || ||| || | |||||| ||||| Sbjct 836543 ATTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCAGAGTTTCTGGGCCTTCACAGT 836602 Query 178204 CTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATA 178263 | | ||||| || ||||| || | || || | ||||| || || || Sbjct 836603 ACGGCGGCCGCGACCTTCCTTTTCGTATTTCTCATAAAGAGCATCGAACTCTTCACCGTA 836662 Query 178264 GACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTT--CC 178321 |||||| | ||||| || || ||||| || ||||| ||| |||| | || | || || Sbjct 836663 GACATCGGCAAGACCTGGGGCTTCATTTGGACAGAACAGAGTCCA--GTCCTTGTTCGCC 836720 Query 178322 TTCACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367 | ||| || |||||| ||||||| ||||| | || ||||||| Sbjct 836721 TCCACACGGCGCATGAAAAGGTCAGGAGTCCACAAAGCGTAGAAAA 836766 >seq35 Length=1739444 Score = 89.7 bits (98), Expect = 1e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || |||||||| || |||||||| || || | ||| || | || || Sbjct 526072 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCC 526013 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| || ||||| ||||| || || | || |||||||| Sbjct 526012 TCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGGATACCCTCCTTGTC 525954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151287121520