Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq44 167 6e-36
seq45 120 7e-22
>seq44
Length=1723839
Score = 167 bits (184), Expect = 6e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||| || ||||||||||| || | ||||| |||| ||||| | ||||||
Sbjct 1003683 AGGACAAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCT 1003624
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| | || || |||||||| ||||| || ||||| |||
Sbjct 1003623 TCAAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCT 1003564
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| |||||| |||||| |||||||| ||||| | ||| || || || ||||| |||
Sbjct 1003563 TGAATCTTTGACTTCACGTTGTCGATGGTATCTGATGATTCGACCTCCAATGTGATGGTC 1003504
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||| || | ||| | |||||
Sbjct 1003503 TTTCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003472
Score = 159 bits (176), Expect = 8e-34
Identities = 168/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||||| || || | ||| |||||||| || || |||| |||||||| | || |||
Sbjct 1003920 CGAAGTCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTG 1003861
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| |||||||||| |||||| ||||| ||||| ||||| || ||||| || ||||| |||
Sbjct 1003860 CGGCCATCTTCTAACTGCTTACCAGCAAAGATCAGTCGCTGCTGGTCTGGAGGAATGCCT 1003801
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|| || || || ||||| ||| || |||||||||||||| | ||| || || ||
Sbjct 1003800 TCTTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCTGAAGATTCGACCTCCAAT 1003741
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||||||||||| || | ||| || | ||| | |||||
Sbjct 1003740 GTGATCGTCTTGCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003700
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| || || |||||||||||||| || | ||||| |||| ||||| | ||||||
Sbjct 1003455 AGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCT 1003396
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| | || || ||||| || ||||| || || ||||||
Sbjct 1003395 TCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCT 1003336
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| |||||| |||||| |||||||||||||| | ||||| || | ||||| |||
Sbjct 1003335 TGAATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGTC 1003276
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | || || | ||| | |||||
Sbjct 1003275 TTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1003244
Score = 96.9 bits (106), Expect = 8e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || || ||||| ||||||||||| | || || ||||| || ||||| || ||
Sbjct 1003114 CCATCCTCGAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTGGAATGCCCTCT 1003055
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||| || ||||||||||| || | ||||| || | |||
Sbjct 1003054 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTG 1002995
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| |||||||| || | || || | ||| | |||||
Sbjct 1002994 ATAGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 1002957
>seq45
Length=1577698
Score = 120 bits (132), Expect = 7e-22
Identities = 125/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| ||| | ||| | |||||||| |||||||| || ||||||||
Sbjct 1410091 TTCTGGATGTTGTAGTCGCTAAGAGTACGGCCATCTTCAAGCTGCTTTCCGGCGAAGATC 1410032
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || || ||||| |||||||| |||||||| ||| ||| |||
Sbjct 1410031 AGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1409972
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|||||||| |||| || || || | ||||| |||||||||||
Sbjct 1409971 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 1409928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530466593312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |