Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq24 111 1e-19 >seq24 Length=2647559 Score = 111 bits (122), Expect = 1e-19 Identities = 565/895 (63%), Gaps = 62/895 (7%) Strand=Plus/Minus Query 4256 TTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATT 4315 ||| ||||| || || || || |||||||| || || ||||| | | || || || Sbjct 1441461 TTTCTGGTAGTCACCGACACGTTTCTCGAAGAAGTTGGTCTTGCCAGCAAGGGAGATGTT 1441402 Query 4316 TTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAGAGCTACAA 4374 ||||| || ||||| || || || | ||| || | || || || ||||| || | Sbjct 1441401 CTCCATGAAGTCAAAGGGGTTGGTGGAGTTATAGTACTTCTTGTTACCA-AGAGCAACCA 1441343 Query 4375 GCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAG-TTCGCAGTTAATTCCAATT 4433 | |||||||| || ||||| || ||||||| ||| || |||| |||| ||||| | Sbjct 1441342 AGAGACGGTCAGCGACGAATTCGATGTACTGGCACATCAGCTTCG-AGTTCATTCCCAGC 1441284 Query 4434 AATCTCACA-GGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 || |||| || || || | ||||| |||||||| || || | || || || ||||| Sbjct 1441283 AAGG-CACATGGGAGAGCATCGGTCAAGAACTCTTGCTCGATGGAAACAGCATCAGTGAT 1441225 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 || |||| || | || ||| | | | || || | || || || Sbjct 1441224 GATGTCTTGAATAACCTGTTGGCTTGGACGAGTGTTGAGGTGGGAGAAGAGCAAGCAGGC 1441165 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 |||||| ||| | ||| || || | |||||| ||||| || || || | || || Sbjct 1441164 AAAATCGGTATGAAGACCCTCATCACGAGAAATCAGCTCGTTGGAGAAAGTCAGACCAGG 1441105 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672 ||| | ||| | ||| || ||||| || || | || || || || || ||||| || || Sbjct 1441104 CATCAGACCACGCTTCTTGAGCCAGAAAATCGAAGCGAAGGAACCGGAGAAGAAAATTCC 1441045 Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCC 4731 || || || || || || || | ||| | || | || | ||| ||| ||||| Sbjct 1441044 CTCGACTGCTGCGAAGGCAACGAGTCGCTGAGCAAAGGTAGATTCCTT-GTCCGAAATCC 1440986 Query 4732 ATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGT-------------GTAT 4778 | || ||||||| ||| || || || ||| |||| || || | Sbjct 1440985 AGCGCAAGGCCCAGTCAGCCTTCTTGCGAATGCAAGGAACTGCAATCAATTAGAACGTTT 1440926 Query 4779 -------ATAGC--GTTAAATA--ATTTACTTTTTTCAA-------------ATGGGT-- 4812 ||| | ||| |||| | ||||| || |||| || ||| Sbjct 1440925 TTCCAACATATCAAGTTTAATACAACTTACTGTTATCAATGGCGTCGAAGAGATAGGTTC 1440866 Query 4813 ----CTTGA--------ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATAT 4860 |||| || || || || || || || ||| | || || || |||| Sbjct 1440865 GCTGCTTGGGTTCGTTGATGTAGGTATCAATGAGCAGAGAATAAGTCTCCGAGTGGATAT 1440806 Query 4861 TTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTAC 4920 | || || |||||| || || |||||||| | ||| || | | ||||||||| | Sbjct 1440805 TCTCCATCATAATCTGGAAGCCATAAAAGCAACGAGCCTCAGGAATCTGAACTTCGCCGC 1440746 Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980 || | || || ||||||||||| || || ||||| ||| ||||| || || | | Sbjct 1440745 TGAAGCGCTCAACCAAGTTTTCGTTCACAATGCCGTCGGAGGCAGCAAAGAAGGCGAGGA 1440686 Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAA---GTTTTTTCCAGTGGGGCAAATCTT 5037 | || || || ||| | |||||||| || | | || ||||||| | | ||||| | Sbjct 1440685 CGTGTGAAATGAAGAATTGTTCGTCTTTGTTCAGGCGGTTGTTCCAGTCGTGTAAATCCT 1440626 Query 5038 TAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 | | | ||||| ||||| ||||||| ||||| || || || || || ||||| Sbjct 1440625 TGGAGAGATCAATCTCTTCCGCAGTCCAGAACGAGGCCTCGGCCTTCTTATACAT 1440571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049350175984