Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq44 181 2e-40
seq45 134 3e-26
seq35 120 6e-22
seq15 89.7 1e-12
seq24 86.0 1e-11
>seq44
Length=1723839
Score = 181 bits (200), Expect = 2e-40
Identities = 177/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| || ||||| | ||| |||||| || ||||||||||| |
Sbjct 1003471 ACCACCACGGAGACGAAGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCGGA 1003412
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| ||||||||||| || || || || || || ||||||||||| || |||||| ||
Sbjct 1003411 TAAAGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTGG 1003352
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||| |||||||| ||||||| || ||| | ||||| ||||| |||| || ||
Sbjct 1003351 AATGCCCTCTTTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTGTCTGAAGACTCCAC 1003292
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 1003291 CTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1003244
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | |||| |||||| || ||||||||||| |
Sbjct 1003699 ACCACCACGGAGACGGAGGACAAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGGA 1003640
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| ||||||||||| || || || || || || ||||||||||| || ||||| ||
Sbjct 1003639 TAAAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGG 1003580
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||| ||||| ||||||| || ||| | ||||| || || || | ||||||
Sbjct 1003579 AATGCCCTCCTTATCTTGAATCTTTGACTTCACGTTGTCGATGGTATCTGATGATTCGAC 1003520
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||||| ||||| || || | |||||||||||| ||||||||
Sbjct 1003519 CTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003472
Score = 163 bits (180), Expect = 6e-35
Identities = 147/185 (79%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974
|| ||||||||||||| || |||||||||||||| ||||| || || || |||||||||
Sbjct 1003141 TGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATCAAA 1003082
Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034
|| || |||||| ||||| ||||| ||||| |||||||| | || ||| | |||||
Sbjct 1003081 CGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATG 1003022
Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094
||||| |||| || || ||||| ||||| ||||| || || | ||||| ||||| |||
Sbjct 1003021 GTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACGAAGATC 1002962
Query 283095 TGCAT 283099
|||||
Sbjct 1002961 TGCAT 1002957
Score = 158 bits (174), Expect = 3e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || || |||| || | ||| || || ||||||||||| ||||
Sbjct 1003926 CCACCCCGAAGTCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGAC 1003867
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||||||||| |||| || || || |||||||||| || || ||||| |||
Sbjct 1003866 AGAGTGCGGCCATCTTCTAACTGCTTACCAGCAAAGATCAGTCGCTGCTGGTCTGGAGGA 1003807
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || || || || || ||||| | || ||| ||||||| ||||| |||| ||||||
Sbjct 1003806 ATGCCTTCTTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCTGAAGATTCGACC 1003747
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||||||||||| || || | |||||||||||| ||||||||
Sbjct 1003746 TCCAATGTGATCGTCTTGCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003700
>seq45
Length=1577698
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| ||| || |||||||| || || || || ||||| ||||||
Sbjct 1410091 TTCTGGATGTTGTAGTCGCTAAGAGTACGGCCATCTTCAAGCTGCTTTCCGGCGAAGATC 1410032
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| || ||||| || |||||||||||||| |||||||| | || || | |||
Sbjct 1410031 AGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1409972
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| || | ||||| || || ||||| ||||| ||||| | ||||| |||||
Sbjct 1409971 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1409913
>seq35
Length=1739444
Score = 120 bits (132), Expect = 6e-22
Identities = 108/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || |||| || | ||| || || ||||||||||||||||
Sbjct 526088 ACCACCACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 526029
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||| ||||| || || || ||||| ||||||| |||||| ||||| ||
Sbjct 526028 AAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGG 525969
Query 282992 AATACCCTCCTTGTCT 283007
|||||||||||||||
Sbjct 525968 GATACCCTCCTTGTCT 525953
>seq15
Length=252517
Score = 89.7 bits (98), Expect = 1e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 316983 GTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAA 317042
||| ||||| |||||||| | |||| || | | |||| | ||||| || ||||
Sbjct 7138 GTCAAGGTCGTGCTCAACGAAGACAGTCTTGACCTCGTTCTTCTTGGGGAAACCCTCCAC 7197
Query 317043 CTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAG 317102
|| |||| || || | ||| || || |||||||| | ||| ||||| || ||||
Sbjct 7198 TTGCTCGTTGTTGATGGCACGCATGAGGGTGGACTTGCCGGAACCGTTGGGTCCCAAAAG 7257
Query 317103 ACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACC 317162
||| || || | || ||||||| || |||| | ||| |||||||||||| ||||
Sbjct 7258 ACCGTAACGCTGACCACGCTTCAGACGCAAGTGGGTCTGGTTGAGAAGAATCTTAGCACC 7317
Query 317163 ATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
|| |||| ||| ||| | || |||||||||||
Sbjct 7318 GTAGGCCAAGTTGAAAGTACAGTTGCAAAGGTCCTCGCC 7356
>seq24
Length=2647559
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 230244 CTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAG 230303
|| ||| | || || ||||||||||| ||||| ||| | || || || || || || ||
Sbjct 1441303 CTGATGTGCCAGTACATCGAATTCGTCGCTGACCGTCTCTTGGTTGCTCTTGGTAACAAG 1441362
Query 230304 AAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAA 230363
|| |||||||||| |||||||| | || |||||| ||| || || || ||
Sbjct 1441363 AAGTACTATAACTCCACCAACCCCTTTGACTTCATGGAGAACATCTCCCTTGCTGGCAAG 1441422
Query 230364 ACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA 230398
|| ||||||||||| || |||||| | || || ||
Sbjct 1441423 ACCAACTTCTTCGAGAAACGTGTCGGTGACTACCA 1441457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738556255392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |