Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq44 168 2e-36
seq45 154 4e-32
seq46 95.1 3e-14
seq35 91.5 4e-13
>seq44
Length=1723839
Score = 168 bits (186), Expect = 2e-36
Identities = 161/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| || || || ||||||||||||||||| ||||||
Sbjct 1003247 CAGATTTTCGTCAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCAGAC 1003306
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||||||| |||||||| || || || || ||||||||
Sbjct 1003307 ACCATCGACAACGTGAAGTCAAAGATTCAAGACAAAGAGGGCATTCCACCTGACCAGCAG 1003366
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| ||||| ||||| |||||||| | ||| | |||| || ||| |
Sbjct 1003367 CGTTTGATCTTCGCTGGAAAGCAGCTTGAAGATGGCCGCACTTTATCCGACTACAACATT 1003426
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| |||||||| || || ||||| ||
Sbjct 1003427 CAGAAAGAATCCACTCTTCATCTCGT 1003452
Score = 154 bits (170), Expect = 4e-32
Identities = 158/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || || || |||||||| | ||||| ||| ||||||
Sbjct 1003703 CAGATCTTCGTTAAGACTCTTACTGGCAAGACGATCACATTGGAGGTCGAATCTTCAGAC 1003762
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||||||||| |||||||| || ||||| ||||||||
Sbjct 1003763 ACCATCGATAACGTCAAGTCCAAGATTCAGGATAAAGAAGGCATTCCTCCAGACCAGCAG 1003822
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| ||||| || || || ||| | |||||||| | ||||| | ||||| ||| ||
Sbjct 1003823 CGACTGATCTTTGCTGGTAAGCAGTTAGAAGATGGCCGCACTCTGTCTGATTACAACATC 1003882
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 1003883 CAGAAGGAGTCCACTCTTCA-CTTG 1003906
Score = 136 bits (150), Expect = 1e-26
Identities = 123/155 (79%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || |||||||| || || ||||||||||||||||| || |||
Sbjct 1002960 CAGATCTTCGTCAAGACCCTCACAGGCAAGACTATCACCCTCGAGGTGGAGTCTTCTGAC 1003019
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| ||||||||||| || || || || ||||||||
Sbjct 1003020 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCACCTGACCAGCAG 1003079
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| | |||||||| ||||| || ||||| |||||
Sbjct 1003080 CGTTTGATCTTCGCTGGAAAGCAACTCGAGGATGG 1003114
>seq45
Length=1577698
Score = 154 bits (170), Expect = 4e-32
Identities = 142/180 (79%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
|||||| || || ||||| || || || |||||||| ||||| || ||| ||||||||
Sbjct 1409912 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCAT 1409971
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
||| || ||||| ||||| |||||||| || || ||||| ||||||||||| || ||
Sbjct 1409972 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCT 1410031
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
|||||||||||||| ||||| |||||||| | |||||| ||| || ||| |||| ||
Sbjct 1410032 GATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGTACTCTTAGCGACTACAACATCCAGAA 1410091
>seq46
Length=1567519
Score = 95.1 bits (104), Expect = 3e-14
Identities = 197/286 (69%), Gaps = 12/286 (4%)
Strand=Plus/Plus
Query 214123 CCAAAGTTTTTCTGGTTGCTTTT---GCGGCAAATGGCATCTTTGTATGCGATGAAAGGC 214179
|||| || || |||||||| || | |||| ||||| ||||| ||||||||
Sbjct 836487 CCAAGATTCTTTTGGTTGCTCTTCTTGTTGCAA---GCATCCTTGTAAAGCATGAAAGG- 836542
Query 214180 ATTCCCAC-CTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGAC 214238
||| ||| ||| ||||| | || ||| || |||||||| |||||||||||
Sbjct 836543 ATTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCAGAGTTTCTGGGCCTTCACAGT 836602
Query 214239 CTTTTTGGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTA 214298
| | | || || |||||||| || |||||||||| || || || ||||||
Sbjct 836603 ACGGCGGCCGCGACCTTCCTTTTCGTATTTCTCATAAAGAGCATCGAACTCTTCACCGTA 836662
Query 214299 GACATCATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATC-CC 214357
|||||| ||||||| || || || || || ||||| ||| |||| |||| | || ||
Sbjct 836663 GACATCGGCAAGACCTGGGGCTTCATTTGGACAGAACAGAGTCCA--GTCCTTGTTCGCC 836720
Query 214358 T-GACTCTTTTCATGAAAAGGTCGGAAGTCCAGATTGCATaaaaaa 214402
| || | |||||||||||| | |||||| | || || ||||
Sbjct 836721 TCCACACGGCGCATGAAAAGGTCAGGAGTCCACAAAGCGTAGAAAA 836766
>seq35
Length=1739444
Score = 91.5 bits (100), Expect = 4e-13
Identities = 90/115 (78%), Gaps = 1/115 (1%)
Strand=Plus/Plus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| || || ||||| |||||||||||||| || ||||||||||| || ||||||||
Sbjct 525954 GACAAGGAGGGTATCCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAGCAGCTCGAG 526013
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
|| || | |||||| | || || ||| |||| || || || || || || ||||
Sbjct 526014 GACGGCCGCACTCTTTCTGACTACAACATCCAGAAGGAGTCCACCCTCCA-CTTG 526067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730459705312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |