Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq44 123 2e-23 seq35 118 1e-21 >seq44 Length=1723839 Score = 123 bits (136), Expect = 2e-23 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || ||| || ||||||||||| |||||||| Sbjct 1003470 CCACCACGGAGACGAAGGACGAGATGAAGAGTGGATTCTTTCTGAATGTTGTAGTCGGAT 1003411 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| | || || |||||||| || ||||| |||| ||||| ||||| | ||| Sbjct 1003410 AAAGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGTGGA 1003351 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||| |||| | ||| | |||| |||| ||| | | | ||||| ||||||| Sbjct 1003350 ATGCCCTCTTTGT-CTTGAATCTTTGACTTC-ACGTTGTCGATGGTGTCTGAAGACTCCA 1003293 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| |||||||||||||| Sbjct 1003292 CCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1003244 Score = 114 bits (126), Expect = 1e-20 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || |||||| || ||||||||||| |||||||| Sbjct 1003698 CCACCACGGAGACGGAGGACAAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGGAT 1003639 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| | || || |||||||| || ||||| |||| ||||| ||||| | |||| Sbjct 1003638 AAAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGA 1003579 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||| | | ||| | |||| |||| ||| | | | || || || || | Sbjct 1003578 ATGCCCTCCTTAT-CTTGAATCTTTGACTTC-ACGTTGTCGATGGTATCTGATGATTCGA 1003521 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || || || ||||| ||||| |||||||| Sbjct 1003520 CCTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003472 Score = 113 bits (124), Expect = 4e-20 Identities = 146/198 (74%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 41677 CTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAG 41736 ||||||||| ||||| ||||||||||| | || ||||| ||||| || ||||| |||| Sbjct 1003142 CTGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATCAA 1003083 Query 41737 GCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-A 41795 ||||| ||||| | |||| || ||| |||||| ||| || ||| ||| | | | Sbjct 1003082 ACGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCCTGGATCTTGGACTT-GACGTTGTCGA 1003024 Query 41796 CAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAA 41855 ||||| ||||||||||| | || || || || || || || ||||| ||||| | Sbjct 1003023 TGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACGAAGA 1002964 Query 41856 TCTGCATGTTATCGATGG 41873 |||||||| || ||||| Sbjct 1002963 TCTGCATG--ATGGATGG 1002948 >seq35 Length=1739444 Score = 118 bits (130), Expect = 1e-21 Identities = 109/138 (79%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||| | ||||| || || ||| ||||||||| ||||| ||||| Sbjct 526091 ACCACCACCACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 526032 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| |||| |||||||||||||||||||| ||||| || || ||||||| Sbjct 526031 AGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGG 525972 Query 41752 GGGAACGCTCTCCTTGTC 41769 ||| | | ||||||||| Sbjct 525971 GGGGATACCCTCCTTGTC 525954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303722617600