Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_000924.1 Length=61670 Score E Sequences producing significant alignments: (Bits) Value seq42 480 3e-131 seq34 107 8e-19 >seq42 Length=3210 Score = 480 bits (532), Expect = 3e-131 Identities = 337/400 (84%), Gaps = 40/400 (10%) Strand=Plus/Plus Query 13684 AGATCTGACCAAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 13743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 610 AGATCTGACCAAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 669 Query 13744 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCTGT 13803 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 670 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCTGT 729 Query 13804 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 13863 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 730 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 789 Query 13864 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGTGCATCCCTCAAAACGAGGGAGG 13923 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 790 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGTGCATCCCTCAAAACGAGGGAAA 849 Query 13924 TTCCCCTAAAATGAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAA 13983 |||||||||| ||||| ||| Sbjct 850 ATCCCCTAAAACGAGGG---------------------------------------ATAA 870 Query 13984 AACATCCCTCAAATTAGGGGATTGCTNNNNNNNNNNNNNNNNGGACACAAAAGACACTAT 14043 ||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 871 AACATCCCTCAAATTGGGGGATTGCTATCCCTCAAAACAGGGGGACACAAAAGACACTAT 930 Query 14044 TACaaaagaaaaaagaaaaGATTATTCGTCCGAGAATTCT 14083 |||||||| ||||||||||||||||||||| ||||||||| Sbjct 931 TACAAAAG-AAAAAGAAAAGATTATTCGTCAGAGAATTCT 969 >seq34 Length=3934 Score = 107 bits (118), Expect = 8e-19 Identities = 70/76 (92%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 9864 TCAATAAATACAATTGGTTATGTTTTTTAGGTGGGCGAACGTGAGGCAAAGAAAACCCGG 9923 ||||||||||||||||||||||| |||| || ||||| ||||||||||||||||||||| Sbjct 3722 TCAATAAATACAATTGGTTATGTGTTTTGGG--GGCGATCGTGAGGCAAAGAAAACCCGG 3779 Query 9924 CGCTGAGGCCGGGCTA 9939 ||||||||||||| || Sbjct 3780 CGCTGAGGCCGGGTTA 3795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197222259479040