Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq17 102 8e-17 >seq17 Length=3189086 Score = 102 bits (112), Expect = 8e-17 Identities = 201/295 (68%), Gaps = 7/295 (2%) Strand=Plus/Minus Query 16466 TCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCT 16525 ||| | || || || ||||| || | | ||| | || ||||| |||||||| || Sbjct 3105937 TCGTTGATGTAGGTGTCAATGAGGAGAGAGTATGTCTCGGAGTGAATGTTCTCCATCATG 3105878 Query 16526 ATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTT--CCACGTAAAATCGTT 16583 ||||| || ||||||||||||||||| || | || || |||| |||| ||| || | Sbjct 3105877 ATCTGGAAACCATAGAAGCATCGAGCTTCAGGAATCTGAACTTCACCACTGAAA--CGCT 3105820 Query 16584 CCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAA 16643 | ||| ||||||||| |||||||| ||| |||||||| || || | | |||| | Sbjct 3105819 CAACCAAGTTCTCATTGACGATACCATCAGAGGCAGCAAAGAAGGCGAGGACGTGCGAGA 3105760 Query 16644 TGAAATA---TTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATAT 16700 | || || || ||||| | | | | ||| || | |||||||| || | || Sbjct 3105759 TAAAGTAGCGTTCATCGTCGTTCAGACGGTTGTTCCAGTCGTGCAAATCTTTCGAGAGAT 3105700 Query 16701 CCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 | | ||||| | ||||| ||| || | ||||| || ||||||| ||| || Sbjct 3105699 CGATCTCTTCGGCAGTCCAGAAGGAGGCTTCGGCCTTCTTGTACATTTGCCAGAT 3105645 Score = 93.3 bits (102), Expect = 4e-14 Identities = 290/442 (66%), Gaps = 18/442 (4%) Strand=Plus/Minus Query 15914 TGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCC 15973 || || |||| ||| || || ||||||||||| || || || | | ||| || || ||| Sbjct 3106537 TGATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGAGAGATGTTCTCC 3106478 Query 15974 ATAAAATCAAAGGGATTAGTAGC-TGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAA 16032 || || |||||||| || || || | | || ||| || || || | ||| || Sbjct 3106477 ATGAAGTCAAAGGGGTTGGTGGCGTTGTAGTA-CTTCTTGTTGCCAAGAGC---AACCAA 3106422 Query 16033 TCTA---TCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT-AA 16088 | || || || || || || || || ||||| || | | || ||||| | || Sbjct 3106421 GAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAGTTCATTCCGAGCAA 3106362 Query 16089 GTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGA 16148 || | |||||||| | || || || | |||||| || |||| || || ||||| Sbjct 3106361 AGCGCAG-GGAAGAGCGTCGGTCAAGAACTCTTGTTCAATGGCAACGGCGTCAACAATGA 3106303 Query 16149 TATCGGTGG----CTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACAC 16204 | || || | | | |||||| ||| ||||| || | | || Sbjct 3106302 TGTCTTCAATAATCTTGGGGCTAGGACGGTT----GTTGAGGTGGGAGAAGAGCAAGCAG 3106247 Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264 || |||||| || || || ||||| | |||||| |||||||| || || || || Sbjct 3106246 GCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCA 3106187 Query 16265 GGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATA 16324 ||||| || |||||||| |||||||| || | ||||| || || || ||||| ||| Sbjct 3106186 GGCATCAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATA 3106127 Query 16325 CCCTCAACAGATGCAAAAGCGA 16346 |||||||||| || || |||| Sbjct 3106126 CCCTCAACAGCAGCGAATGCGA 3106105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414016439200