Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq17 172 6e-38 seq28 129 6e-25 seq27 104 2e-17 seq19 96.9 4e-15 >seq17 Length=3189086 Score = 172 bits (190), Expect = 6e-38 Identities = 315/455 (69%), Gaps = 5/455 (1%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| |||||||||||| | | || ||| || |||| | |||||| Sbjct 3106042 AGAAGGCCGACTGGGCTCTGCGCTGGATCTCGGACAAGGAGTCCACCTTTGCTCAGCGCC 3106101 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || || ||||| || || ||||| ||||||| || ||| ||| ||| | || || | Sbjct 3106102 TTGTCGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTATCTTCT 3106161 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 || | |||||||| || | ||||| ||| |||| ||| ||||||||| ||||| | | Sbjct 3106162 GGTTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCTCTCGTG 3106221 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 |||||||||| || |||||||||||| ||||| ||| || | | || || | Sbjct 3106222 ACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCTCCCACCTCAACAACCGTCCTA 3106281 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | | | || ||| | ||||| || ||||| || || ||| | | Sbjct 3106282 GCCCCAAGATTATTGAAGACATCATTGTTGACGCCGTTGCCATTGAACAAGAGTTCTTGA 3106341 Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAA-ACGATGTCGCAATACAT 117339 |||| || || || |||| | |||| ||| | || | |||| ||||| || ||||| Sbjct 3106342 CCGACGCTCTTCC-CTGCGCTTTGCTCGGAATGAACT-CGAAGTTGATGTGCCAGTACAT 3106399 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 ||||||||| || ||| | || || | | || | | | ||| |||||||| | | Sbjct 3106400 CGAGTTCGTTGCTGACCGTCTCTTGGTTGCTCTTGGCAACAAGAAGTACTACAACGCCAC 3106459 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTC-CTTG 117433 |||||| | ||||| ||| | |||||| |||| Sbjct 3106460 CAACCCCTTTGACTTCATGGAGAACATCTCTCTTG 3106494 >seq28 Length=3612999 Score = 129 bits (142), Expect = 6e-25 Identities = 137/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| ||||||||| |||| ||||| || |||||| | | Sbjct 1575473 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATC 1575532 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| |||||| | |||||||| || || Sbjct 1575533 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 1575592 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || || || ||||| || || | ||||| ||| ||||||||||||||||||| Sbjct 1575593 ATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAACATCCAGAAG 1575652 Query 40879 G 40879 | Sbjct 1575653 G 1575653 >seq27 Length=4195530 Score = 104 bits (114), Expect = 2e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| | |||||||| || | |||| ||| || || ||||| || Sbjct 1511950 GACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAA 1512009 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||| ||||||||| |||||||||||||||||||||| |||| || || Sbjct 1512010 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCA 1512059 >seq19 Length=2486755 Score = 96.9 bits (106), Expect = 4e-15 Identities = 135/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || ||||||||| | || || || | | Sbjct 1820601 ATGCAGATCTTCGTCAAGACCCTCACTGGGAAGACCATCACCCTTGAGGTGGAGTCTTCT 1820660 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || |||| ||||| |||||||| || | ||||| Sbjct 1820661 GATACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCA 1820719 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| || ||||| ||||| || |||| |||||||| |||||||| Sbjct 1820720 GCAGCGTTTGATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTTTCTGACTACAA 1820779 Query 40869 CATCCAG 40875 ||| ||| Sbjct 1820780 CATTCAG 1820786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218813585600