Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq27 105 5e-18 seq19 104 2e-17 >seq27 Length=4195530 Score = 105 bits (116), Expect = 5e-18 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||||||| || ||| |||| || Sbjct 1512065 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCG 1512006 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 || || ||||||||||| ||||| ||||| |||||||| || | |||||||||||| Sbjct 1512005 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTC 1511950 >seq19 Length=2486755 Score = 104 bits (114), Expect = 2e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 45180 CGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCT 45239 |||| || || || ||||| ||||| ||||| ||||| ||||| ||||| | |||||||| Sbjct 1821041 CGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCT 1820982 Query 45240 TGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAA 45299 | ||| ||| || ||| || | | | |||| ||||||||| | ||| | Sbjct 1820981 TATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGA 1820922 Query 45300 TCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | |||||||| || |||||||| |||||||||||||| Sbjct 1820921 TGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 1820885 Score = 95.1 bits (104), Expect = 1e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 45151 CTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAA 45210 ||||||||||||||| || |||| |||| || || || || || || || ||||| Sbjct 1820786 CTGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAA 1820727 Query 45211 CCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCAC 45270 ||||| ||||| ||||| | |||||||||||| ||| || ||| || | | Sbjct 1820726 ACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGAT 1820667 Query 45271 GCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGAT 45330 | | || | ||||||||| | ||| || ||||| || || || ||||| || ||||| Sbjct 1820666 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGAT 1820607 Query 45331 TTGCATGTTG 45340 |||||| || Sbjct 1820606 CTGCATGATG 1820597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074911101260