Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq27 282 4e-71 seq17 131 1e-25 seq28 86.0 6e-12 >seq27 Length=4195530 Score = 282 bits (312), Expect = 4e-71 Identities = 586/868 (68%), Gaps = 16/868 (2%) Strand=Plus/Minus Query 23120 TGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACC 23179 |||||||| || ||||| | |||||||||||||||| |||| | || ||||| | Sbjct 142362 TGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTC 142303 Query 23180 TGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAAC---ACGTCG--CACGTACC 23234 || | ||||| ||| || ||| | ||||||| | || ||| || |||| ||| Sbjct 142302 TGAGCCTCGAGGATGGCGTACCAGAGCTTCTGAGCCTTGACGGTACGACGACCACG-ACC 142244 Query 23235 TGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCA 23294 | || ||| ||||||| | |||||| || ||||| || | ||||| |||||| | Sbjct 142243 TTCCCTCT----CGTACTTCTCGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAA 142188 Query 23295 GGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCA 23354 | |||| | | | || || | | |||| | || ||| || || | || Sbjct 142187 GACCGGAAGCCTCGTTAGGGCAGAACAATGTCCAGTCTTGGTTGGCTTCTACACGACGCA 142128 Query 23355 TAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGC 23414 | || ||||| || |||| | || |||||||| || ||||| || || || ||||||| Sbjct 142127 TGAAGAGATCAGGGGTCCACAAGGCATAGAACAGATCACGGGCACGGACTTCTTCTTTGC 142068 Query 23415 CGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAA 23474 || |||||| | || | || || || || |||| ||||| ||||||||||| | Sbjct 142067 CGTGGTTCTTGCGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGA 142008 Query 23475 CGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGT 23534 |||||||| || || | ||| || || || || |||||||| | ||| ||||||||| Sbjct 142007 TAGCAAACGCACCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGA 141948 Query 23535 ACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAAC 23594 ||||||| ||||| ||||| |||||||| || | || || | | |||| Sbjct 141947 ACACTCTGAGCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAAC 141888 Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654 | | | || | | ||| || | || ||| || || ||| | || || || ||||| | Sbjct 141887 CAGTGGAACGGATGCGGTGGACATTGAGACCAATACCACCGGCAGACTTGGAGATCATTG 141828 Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714 | ||| || ||||| || ||||| ||||| |||||||| || || | | || | || Sbjct 141827 CACATGTCTTGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGA 141768 Query 23715 AACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCG 23774 | || |||| | || | | || ||| | || ||||| || || ||||| | Sbjct 141767 AGCAAGAAGCAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTG 141708 Query 23775 TAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGT 23834 | |||||| | ||||| | ||||| || || ||||| || |||| ||| |||| Sbjct 141707 TGAAGTATTTCTGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGT 141648 Query 23835 GTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG---ACCGTGACGCCGT 23891 | ||||| | ||| || ||||| ||||||| ||| || | ||| ||| | ||| | Sbjct 141647 GAATACCAACGGCAACACGCATGATCATGTGTTGGGGACGTTCGGCAACCTT---GCCAT 141591 Query 23892 TAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGT 23951 | ||| ||| || || || |||| | || || || || || || | |||||| |||| Sbjct 141590 TGATTCTGAGGAGGTAGGAGCGTTCGAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGT 141531 Query 23952 CACGATCGTGCACTATGGCCGAATTCAA 23979 |||| || | || |||||||| ||||| Sbjct 141530 CACGGTCATAAACAATGGCCGAGTTCAA 141503 >seq17 Length=3189086 Score = 131 bits (144), Expect = 1e-25 Identities = 314/466 (67%), Gaps = 18/466 (4%) Strand=Plus/Plus Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017 |||| || || || | || |||| ||||| || || || ||||| ||||| || ||| Sbjct 3106084 CCACCTTTGCTCAGCGCCTTGTCGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCT 3106143 Query 58018 GCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCA 58077 ||||| | || || ||| |||||||||| || ||||||| ||| |||| || || Sbjct 3106144 CTTTTGCCTCTATCTTCTGGTTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCA 3106203 Query 58078 ACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTC 58137 ||||| | || || || ||||||||||| || || || ||||| ||| | | | ||| | Sbjct 3106204 ACGAGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCTCCC 3106263 Query 58138 ACATTGTCAATAAACCGACGCGGGATC--GCATCTTG--GACATTATCACCGAGGCGGTC 58193 || |||| ||||| | | | | | ||| ||||| || || || || Sbjct 3106264 AC---CTCAA-CAACCGTCCTAGCCCCAAGATTATTGAAGACATCATTGTTGACGCCGTT 3106319 Query 58194 GCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAAT 58253 || || ||| | ||||| | ||||| || || || || ||||||| |||||| Sbjct 3106320 GCCATTGAACAAGAGTTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAACTCG 3106379 Query 58254 GATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGG- 58312 | ||||||| ||||||| ||||| ||||| ||| | || ||| | | || |||| Sbjct 3106380 AAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTG--CT-CTTGGC 3106436 Query 58313 ----AGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCG 58368 ||| || | |||||| | | || || ||||| || ||| | ||||| || | Sbjct 3106437 AACAAGA-AGT-ACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTG 3106494 Query 58369 AGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414 |||||||| ||||| ||||| || ||| | || ||||| || Sbjct 3106495 CCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTATCAGAA 3106540 >seq28 Length=3612999 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| || || ||||| || |||||| |||| || || | ||||||| | Sbjct 1575472 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCAT 1575531 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| || | || ||||||||||||||||| Sbjct 1575532 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 1575591 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGA 31347 || || || || || ||| | ||||| Sbjct 1575592 GATCTTTGCCGGAAAGCAGCTTGAAGA 1575618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766065675200