Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq17 120 3e-22 seq19 84.2 2e-11 >seq17 Length=3189086 Score = 120 bits (132), Expect = 3e-22 Identities = 345/526 (66%), Gaps = 15/526 (3%) Strand=Plus/Plus Query 52541 TTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACG 52600 ||| || ||||| || | ||||| |||| || ||||| || |||||| || Sbjct 3106018 TTGGCATAGTTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCGCTGGATCTCGGACA 3106077 Query 52601 ACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGttttttt 52660 | | |||| ||||| | || || ||||| || ||| || || ||| | || || | Sbjct 3106078 AGGAGTCCACCTTTGCTCAGCGCCTTGTCGCATTCGCTGCTGTTGAGGGTATCTTCTTCT 3106137 Query 52661 CGGGTAGTTTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCCCGGCCTCACG 52719 | || |||||| | || || | | || || | ||| | ||||| ||| | || Sbjct 3106138 CTGGCTCTTTTGCCTCTATCTTCTGGTTGAAGAAACGTGGTT-TGATGCCTGGCTTGACC 3106196 Query 52720 TTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGTTTG-TA 52778 || ||||||| | || || || ||||| || | ||||| || ||||| || ||| | Sbjct 3106197 TTCTCCAACGAGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTC 3106256 Query 52779 TTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAA----ATTCTAGACATGTTTA 52834 || | || | | || || ||| || || ||| |||||| || Sbjct 3106257 TTCTCCCAC-CTC-------AACAACCGTCCTAGCCCCAAGATTATTGAAGACATCATTG 3106308 Query 52835 AAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGG 52894 || ||||| | ||||||| ||||||| || || |||||| | ||| | ||| | | Sbjct 3106309 TTGACGCCGTTGCCATTGAACAAGAGTTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCG 3106368 Query 52895 GCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGC 52954 | |||||| ||| |||||||| ||||||||||||| ||||| ||| | || ||| | Sbjct 3106369 GAATGAACTCGAAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTG 3106428 Query 52955 AGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATAT 53014 || || | ||| ||||| || || ||||||||| || ||| | ||||| | Sbjct 3106429 CTCTTGGCAACAAGAAGTACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACATCT 3106488 Query 53015 CGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTA 53060 | || | ||||| || ||||| ||||||| ||||| || || || Sbjct 3106489 CTCTTGCCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 3106534 >seq19 Length=2486755 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/158 (73%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||| |||||||| || ||||| |||||| ||| ||||| || ||||| || || || || Sbjct 1821040 GTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTT 1820981 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCA 139727 || ||| | || | || | | || | ||||| | || ||||||||||| ||| | Sbjct 1820980 ATCC-TGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGA 1820922 Query 139728 CCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||||||||| | || || || || ||||||||| Sbjct 1820921 TGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCATA 1820884 Score = 82.4 bits (90), Expect = 8e-11 Identities = 114/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 |||||||||||| || |||||| |||||| ||| ||||| || ||||| ||||| || || Sbjct 1820756 GTCTTCGAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTT 1820697 Query 139669 GTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCA 139727 ||| ||| | || | || | | || | || || | | ||||||||||| ||| | Sbjct 1820696 GTC-CTGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCCACCTCAAGGGTGA 1820638 Query 139728 CCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || || | || || ||||| || ||||| Sbjct 1820637 TGGTCTTCCCAGTGAGGGTCTTGACGAAGATCTGCAT 1820601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063627952000