Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq27 223 5e-53 seq17 89.7 7e-13 >seq27 Length=4195530 Score = 223 bits (246), Expect = 5e-53 Identities = 751/1147 (65%), Gaps = 28/1147 (2%) Strand=Plus/Minus Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 || |||| ||| || || || ||||||| || | | |||| || || || |||||| Sbjct 142455 GAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTATTCAATAATCTCTGTGCAG 142396 Query 79681 AGGTT---ACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 79737 ||||| ||||| || || || | || | ||| || ||||| ||||| || ||| Sbjct 142395 AGGTTGGAACTACGGATA---GTACCGAGGTTCTTTTGGTTGCTCTTCTTGTTGCAAGCA 142339 Query 79738 TCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAG 79797 ||||| || || |||||||| ||||||| ||| |||||| || | || || | |||| Sbjct 142338 TCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCGTACCAG 142279 Query 79798 ACGACTC-GAGCCTTTATTATA-GACTTGTATCTCTTTTCTCTTTCGTA-TTGT-GTATA 79853 | | || ||||||| | || ||| | | || | || ||||| || | ||| | Sbjct 142278 A-GCTTCTGAGCCTTGACGGTACGACGACCACGACCTTCC-CTCTCGTACTTCTCGTACA 142221 Query 79854 TAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACAT 79913 || | | | ||||| || || | || ||| | | || | | |||| ||| || | Sbjct 142220 -AAGCAT-CAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTAGGGCAGAA 142163 Query 79914 CAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 79973 ||| | ||| ||| | | | ||| || ||| ||||||||||| |||| | || Sbjct 142162 CAATGTCCAGTCTTGGTTGGCTTCTACACGACGCATGAAGAGATCAGGGGTCCACAAGGC 142103 Query 79974 TATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 80032 ||| || ||||| | || | || || || || ||||| ||| || |||| Sbjct 142102 -ATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCGTGGTTCTTGCGAAGGTCAAGGA 142044 Query 80033 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGT 80092 || | | || ||| || ||||| || || | ||| || || | | || || || |||| Sbjct 142043 ACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCACCAGGGCGCTTGT 141984 Query 80093 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 80152 | ||||| || || | |||||| |||||||| || | ||||| | ||| || | || || Sbjct 141983 TACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGGCACAAGAC 141924 Query 80153 CATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAAT 80210 | || || ||||||||||| || ||| ||| ||| ||| ||| || | || Sbjct 141923 CGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGGACAT 141864 Query 80211 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 80270 || ||||| || || || || || ||||| | ||| ||| || | |||||||| Sbjct 141863 TG--AGACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCTTGAGAGTATCATA 141806 Query 80271 GATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 80330 ||| ||||| ||||| || || |||||| | || || || || | || | || Sbjct 141805 GATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCG 141746 Query 80331 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAG 80390 | ||| || || || || || || ||||| ||||| || || |||| | ||||| | Sbjct 141745 AGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGAGACATCAA 141686 Query 80391 ATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCAT 80450 ||||| |||||||| ||| || || | | ||||| || || || |||||||| Sbjct 141685 GTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAACGGCAACACGCAT 141626 Query 80451 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTC 80510 | |||||| || || | ||| | | |||| ||| ||| | | | ||| || ||| Sbjct 141625 GATCATGTGTTGGGGACGTTCGGCAACCTTGCCATTGATTCTGAGGAGGTAGGAGCGTTC 141566 Query 80511 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570 | ||| || ||||| || || | || ||||| || || |||| ||| ||||||| Sbjct 141565 GAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGTCACGGTCATAAACAATGGCCGAGTT 141506 Query 80571 GAGTTTATCCTTATATTTGTTAAC---TACATCCATGGTGATACTTGAAATAATCGGAGA 80627 | || || || || | || ||| ||| | || | ||||| || || | Sbjct 141505 CAATTCTTCTGCATGCTTCATGACAGTCTCATACAT-CTCATCC--GAAATCAT-GGGTA 141450 Query 80628 ATG-TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 80686 ||| || || || || || || |||| | | | ||| || ||||| || ||| Sbjct 141449 ATGCCTTATTGTTCTTGGGGTTGACGTAGTGGTACAGATCTTCAATCACAGCAGAAAACT 141390 Query 80687 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAAT 80746 | || || || | ||||||||| || || ||||| || | ||||| | | || |||| Sbjct 141389 GCTTCTTGGTCTGCTTGTGTAGGTTGGAGACGGCGATACGAGCGGCGAGGACAGCGTAAT 141330 Query 80747 CTGGATG 80753 | || || Sbjct 141329 CCGGGTG 141323 >seq17 Length=3189086 Score = 89.7 bits (98), Expect = 7e-13 Identities = 148/213 (69%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 ||| || || || ||| ||| ||||||||||| | | || || |||||||| || || Sbjct 3106253 CAAGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGT 3106194 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 | || ||||| | ||||| || || | ||| || || || ||||| || ||||| || Sbjct 3106193 CAAGCCAGGCATCAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAA 3106134 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTC 50132 |||||| || || || || || || || ||||| | || || | ||| | |||| Sbjct 3106133 GAAGATACCCTCAACAGCAGCGAATGCGACAAGGCGCTGAGCAAAGGTGGACTCCTTGTC 3106074 Query 50133 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 ||||| ||||||| ||||||||||| Sbjct 3106073 CGAGATCCAGCGCAGAGCCCAGTCGGCCTTCTT 3106041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268261298400