Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq17 178 2e-39 >seq17 Length=3189086 Score = 178 bits (196), Expect = 2e-39 Identities = 583/896 (65%), Gaps = 79/896 (9%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| | |||||||| ||||| | ||||||| ||||||| Sbjct 3105645 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCCTTCTGGACTGCCGAAGAGATCGATCTC 3105704 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || || || || |||| ||| | | ||| ||| || ||| || | ||||| ||| Sbjct 3105705 TCGAAAGATTTGCACGACTGGAACAACCGTCTGAACGACGATGAACGCTACTTTATCTCG 3105764 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAA-TCTGTTGACACG 125197 ||| | | ||||||||||| | ||| ||||| |||||||| || || | ||||| || Sbjct 3105765 CACGTCCTCGCCTTCTTTGCTGCCTCTGATGGTATCGTCAATGAGAACTTGGTTGA-GCG 3105823 Query 125198 ATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATG 125255 ||| | | |||| | ||||| || | ||| ||||| || || ||||| |||||| Sbjct 3105824 TTTCAGTGGTGAAGTTCA-GATTCCTGAAG-CTCGATGCTTCTATGGTTTCCAGATCATG 3105881 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC- 125314 || |||||| | ||||| || | |||||| || ||||||| ||||| ||| || Sbjct 3105882 ATGGAGAACATTCACTCCGAGACATACTCTCTCCTCATTGACACCTACATCAACGAACCC 3105941 Query 125315 --GCAACGTA-----------------------AACA-CATGCTCTT------------- 125335 ||||||| |||| | | |||| Sbjct 3105942 AAACAACGTACCTACCTTTTCGACGCTATTGACAACAGTAAGTTCTTCTTGCCTATGAAG 3106001 Query 125336 TAACGC--------AATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATT 125387 | | || ||| | || || || | || || || ||||| | |||| | Sbjct 3106002 TGATGCTCTGGTCTAATTGGCATAGTTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTG 3106061 Query 125388 CGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTA 125447 || |||||| ||| | |||| | | || | | || || |||||||| || || Sbjct 3106062 CGCTGGATCTCGGACAAGGAGTCCACCTTTGCTCAGCGCCTTGTCGCATTCGCTGCTGTT 3106121 Query 125448 GAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTC 125507 ||||| |||||||| || || |||||| | ||||| ||| | ||||| || || | Sbjct 3106122 GAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGGTTGAAGAAACGTGGTTTG 3106181 Query 125508 ATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGAC 125567 ||||| || |||| | |||||| |||| ||||| |||||||| || ||| ||| Sbjct 3106182 ATGCCTGGCTTGACCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGTCTTCACACCGAC 3106241 Query 125568 TTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGC-AGATCCAGCGATGA-A 125624 |||||| | || || || || | || | || || | || ||| ||| | Sbjct 3106242 TTTGCCTGCTTGCTCTTCTCCCACC--TCAACAACC---GTCCTAGCCCCA-AGATTATT 3106295 Query 125625 AAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCC 125684 | | ||| |||||| || ||||| || ||||||||||| | ||||| | Sbjct 3106296 GAAGACAT---CATTGT---TGACGCCGTTGCCATTGAACAAGAGTTCTTGACCGACGCT 3106349 Query 125685 CTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTG 125744 || || | || | || ||||||| ||| | |||||| ||||||| ||||| || Sbjct 3106350 CTTCCCTGCGCTTTGCTCGGAATGAACTCGAAGTTGATGTGCCAGTACATCGAGTTCGTT 3106409 Query 125745 GCAGATCGTCTACTGTACGAGTTG--ATTGGCCGCAAGA---TTTACAACGCCAAGAATC 125799 || || ||||| || |||| ||||| ||||| |||||||||| || | Sbjct 3106410 GCTGACCGTCTCTTG-----GTTGCTCTTGGCAACAAGAAGTACTACAACGCCACCAACC 3106464 Query 125800 CCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 ||||||| |||||| | ||| || || | || ||||||||||| ||||||||| Sbjct 3106465 CCTTTGACTTCATGGAGAACATCTCTCTTGCCGGCAAGACCAACTTCTTCGAGAAG 3106520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058644205600