Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq42 480 3e-131 seq34 158 4e-34 >seq42 Length=3210 Score = 480 bits (532), Expect = 3e-131 Identities = 337/400 (84%), Gaps = 40/400 (10%) Strand=Plus/Plus Query 11845 AGATCTGACCAAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 11904 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 610 AGATCTGACCAAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 669 Query 11905 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCTGT 11964 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 670 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCTGT 729 Query 11965 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 12024 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 730 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 789 Query 12025 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGTGCATCCCTCAAAACGAGGGAGG 12084 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 790 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGTGCATCCCTCAAAACGAGGGAAA 849 Query 12085 TTCCCCTAAAATGAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAA 12144 |||||||||| ||||| ||| Sbjct 850 ATCCCCTAAAACGAGGG---------------------------------------ATAA 870 Query 12145 AACATCCCTCAAATTAGGGGATTGCTNNNNNNNNNNNNNNNNGGACACAAAAGACACTAT 12204 ||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 871 AACATCCCTCAAATTGGGGGATTGCTATCCCTCAAAACAGGGGGACACAAAAGACACTAT 930 Query 12205 TACaaaagaaaaaagaaaaGATTATTCGTCCGAGAATTCT 12244 |||||||| ||||||||||||||||||||| ||||||||| Sbjct 931 TACAAAAG-AAAAAGAAAAGATTATTCGTCAGAGAATTCT 969 >seq34 Length=3934 Score = 158 bits (174), Expect = 4e-34 Identities = 107/120 (89%), Gaps = 4/120 (3%) Strand=Plus/Plus Query 8592 GAGATCTGGATTGCGTTGTTTAGCAAGTTGTATCTATTTATTTTTCAACAAATACAATTG 8651 |||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 3678 GAGATCTGAATTGCTATGTTTAGTGAGTTGTATCTATTTATTTTTCAATAAATACAATTG 3737 Query 8652 GTTATGTGTTTTTAGGTGTGGGGATCGTGAGGCAAAGAAAACCCGGCGCTGAGGCCGGGT 8711 |||||||||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct 3738 GTTATGTGTTTT----GGGGGCGATCGTGAGGCAAAGAAAACCCGGCGCTGAGGCCGGGT 3793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185254268006240