Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_004914.3 Length=62706 Score E Sequences producing significant alignments: (Bits) Value seq42 223 1e-53 seq34 145 3e-30 >seq42 Length=3210 Score = 223 bits (246), Expect = 1e-53 Identities = 135/143 (94%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 43057 TTACCTTCAACCTCAAGCCAGAATGCAGAGTCACTGGCTTTTTTGGTTGTGCTTACCAAT 43116 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct 2 TTACCTTCAACCTCAAGCCAGAATGCAGAATCACTGGCTTTTTTGGTTGTGCTTACCCAT 61 Query 43117 CTCTCCGCATCACCTTTGGTAAAGGTTCTGAGTTCTGGAGAGAACATCCCAGCCTGAACA 43176 ||||||||||||||||||||||||||||| || | || ||||||||||| ||||||||| Sbjct 62 CTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTTAGGTGAGAACATCCCTGCCTGAACA 121 Query 43177 TGAGAAAAAACAGGGTACTCATA 43199 ||||||||||||||||||||||| Sbjct 122 TGAGAAAAAACAGGGTACTCATA 144 >seq34 Length=3934 Score = 145 bits (160), Expect = 3e-30 Identities = 105/120 (88%), Gaps = 5/120 (4%) Strand=Plus/Plus Query 41349 GAGAGATCAGAATTGCGTTGTTTAGTGAGTTGTATCTATTTATTTTCCAATAAATACAAT 41408 |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 3676 GAGAGATCTGAATTGCTATGTTTAGTGAGTTGTATCTATTTATTTTTCAATAAATACAAT 3735 Query 41409 TGGTTATGTGtttttttGGGCGA----GAGGAAAAGAAAACCCGGCATGGAGGCCGGGTT 41464 |||||||||| |||| |||||| |||| |||||||||||||| ||||||||||| Sbjct 3736 TGGTTATGTG-TTTTGGGGGCGATCGTGAGGCAAAGAAAACCCGGCGCTGAGGCCGGGTT 3794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200534253359220