Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015-
01-16] 60 sequences; 36,402,801 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq19 123 6e-23
seq17 93.3 1e-13
>seq19
Length=2486755
Score = 123 bits (136), Expect = 6e-23
Identities = 139/186 (75%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 104374 CTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAG 104433
|||||| || |||||||| || || | ||||||||| || || || |||||||| || |
Sbjct 1820786 CTGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAA 1820727
Query 104434 CCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTAC 104493
| ||| || |||||||| || || || || ||||||||||| | || || || || |
Sbjct 1820726 ACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGAT 1820667
Query 104494 GGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATAT 104553
|||||| || || ||||| || || || ||||| ||||| || || || || || ||
Sbjct 1820666 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGAT 1820607
Query 104554 CTGCAT 104559
||||||
Sbjct 1820606 CTGCAT 1820601
Score = 111 bits (122), Expect = 4e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || || ||||| ||||| | ||| ||||||||||| || |||
Sbjct 1821801 GTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCTTCTAGTTGCTTACCA 1821742
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481
|||||||| | | ||| || || || || || || || ||||| || || |||||| ||
Sbjct 1821741 GCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCTTGGAT-TTTGCTCTT 1821683
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | ||| || | ||| || || | ||| |||||||| || || | ||
Sbjct 1821682 CACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTCTTTCCGGTCAAGGT 1821623
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 1821622 CTTGACGAAAATCTGCAT 1821605
Score = 91.5 bits (100), Expect = 3e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
||||| || || || |||||||| || || | | ||| || |||||||| || || ||
Sbjct 1821042 CCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCC 1820983
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521
|||||||||||||| | || || || || | ||| || | || ||||| || ||
Sbjct 1820982 TTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTG 1820923
Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| || ||||| || || ||||| || |||||
Sbjct 1820922 ATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 1820885
>seq17
Length=3189086
Score = 93.3 bits (102), Expect = 1e-13
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
|| || || || ||||| || ||||| ||||| || || ||||||||| ||||||| |||
Sbjct 3106104 GTCGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGG 3106163
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
||||||||| | || | ||||| || || || ||||| ||||| | || | |||
Sbjct 3106164 TTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCTCTCGTGAC 3106223
Query 269258 GAAGGTTTACACTGCGACTTCGCTTGTTT 269286
|| ||| | ||| |||||| || || ||
Sbjct 3106224 GAGGGTCTTCACACCGACTTTGCCTGCTT 3106252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397514862480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |