Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq19 123 6e-23 seq17 93.3 1e-13 >seq19 Length=2486755 Score = 123 bits (136), Expect = 6e-23 Identities = 139/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 104374 CTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAG 104433 |||||| || |||||||| || || | ||||||||| || || || |||||||| || | Sbjct 1820786 CTGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAA 1820727 Query 104434 CCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTAC 104493 | ||| || |||||||| || || || || ||||||||||| | || || || || | Sbjct 1820726 ACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGAT 1820667 Query 104494 GGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATAT 104553 |||||| || || ||||| || || || ||||| ||||| || || || || || || Sbjct 1820666 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGAT 1820607 Query 104554 CTGCAT 104559 |||||| Sbjct 1820606 CTGCAT 1820601 Score = 111 bits (122), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || ||||| ||||| | ||| ||||||||||| || ||| Sbjct 1821801 GTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCTTCTAGTTGCTTACCA 1821742 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 |||||||| | | ||| || || || || || || || ||||| || || |||||| || Sbjct 1821741 GCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCTTGGAT-TTTGCTCTT 1821683 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||| || | ||| || || | ||| |||||||| || || | || Sbjct 1821682 CACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTCTTTCCGGTCAAGGT 1821623 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 1821622 CTTGACGAAAATCTGCAT 1821605 Score = 91.5 bits (100), Expect = 3e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || |||||||| || || | | ||| || |||||||| || || || Sbjct 1821042 CCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCC 1820983 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||||||||| | || || || || | ||| || | || ||||| || || Sbjct 1820982 TTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTG 1820923 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||| || || ||||| || ||||| Sbjct 1820922 ATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 1820885 >seq17 Length=3189086 Score = 93.3 bits (102), Expect = 1e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || || || || ||||| || ||||| ||||| || || ||||||||| ||||||| ||| Sbjct 3106104 GTCGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGG 3106163 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 ||||||||| | || | ||||| || || || ||||| ||||| | || | ||| Sbjct 3106164 TTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCTCTCGTGAC 3106223 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGTTT 269286 || ||| | ||| |||||| || || || Sbjct 3106224 GAGGGTCTTCACACCGACTTTGCCTGCTT 3106252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397514862480