Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015-
01-16] 60 sequences; 36,402,801 total letters
Query= NC_005344.1
Length=39043
Score E
Sequences producing significant alignments: (Bits) Value
seq34 506 5e-139
>seq34
Length=3934
Score = 506 bits (560), Expect = 5e-139
Identities = 297/306 (97%), Gaps = 3/306 (1%)
Strand=Plus/Plus
Query 25351 GGCTTGCTGTACCATGTGCGCTGATTCTTGCGCTCAATACGCTGCAGGTTGCTTTCAATC 25410
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3071 GGCTTGCTGTACCATGTGCGCTGATTCTTGCGCTCAATACGTTGCAGGTTGCTTTCAATC 3130
Query 25411 TGTTCGTGGTATTCAGCCAGCACCGTAAGGTCTATCGGATTCAGTGCGCTTTCTACTCGT 25470
|||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 3131 TGTTTGTGGTATTCAGCCAGCACTGTAAGGTCTATCGGATTTAGTGCGCTTTCTACTCGT 3190
Query 25471 GATTTCGGTTTGCGATTCAGCGAGAGAATAGGGCGGTTAACTGGTTTTGCGCTTACCCCA 25530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3191 GATTTCGGTTTGCGATTCAGCGAGAGAATAGGGCGGTTAACTGGTTTTGCGCTTACCCCA 3250
Query 25531 ACTAACAGGGGATTTGCTGCTTTCCATTGAGCCTGTTTCTCTGCGCGACGTTCGCGGCGG 25590
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3251 ACCAACAGGGGATTTGCTGCTTTCCATTGAGCCTGTTTCTCTGCGCGACGTTCGCGGCGG 3310
Query 25591 CGTGTTTGTGCATCCATCTGGATTCTCCTGTCAGTTAGCTTTGGTGGTGTGGTGGC--TG 25648
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 3311 CGTGTTTGTGCATCCATCTGGATTCTCCTGTCAGTTAGCTTTGGTGGTGT-GTGGCAGTT 3369
Query 25649 GTAGTC 25654
||||||
Sbjct 3370 GTAGTC 3375
Score = 167 bits (184), Expect = 6e-37
Identities = 94/95 (99%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 25846 CACACCCCAAAGCCTTCTGCTTTGAATGCTGCCCTTCTTCAGGGCTTAATTTTTAAGAGC 25905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3456 CACACCCCAAAGCCTTCTGCTTTGAATGCTGCCCTTCTTCAGGGCTTAATTTTTAAGAGC 3515
Query 25906 CTCACCTTCATGGTGGTCAGTGCGTCCTGCTGATG 25940
||||||||||||||||||||||||||||||||||
Sbjct 3516 GTCACCTTCATGGTGGTCAGTGCGTCCTGCTGATG 3550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124815911068600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |