Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq17 178 2e-40 seq37 105 1e-18 >seq17 Length=3189086 Score = 178 bits (196), Expect = 2e-40 Identities = 191/250 (76%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||||| | || || |||||||| || ||||||||||| ||||| Sbjct 2363037 GCCAAGCGTCACCGTAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCTAT 2362979 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||||||||||| ||||||||| |||| | || |||| ||||| | Sbjct 2362978 CCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAAAC 2362919 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | |||| ||||||| || ||||||| |||||| || || || || Sbjct 2362918 CCGCGGTGTCCTCAAGACCTTCCTCGAGGGTGTTATCCGTGATGCCGTCACATACACTGA 2362859 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | ||| | ||||| || | || || || || Sbjct 2362858 GCACGCCAAGCGAAAGACTGTCACATCTCTCGATGTTGTCTACGCTCTCAAGCGACAGGG 2362799 Query 16672 CCGTAAGATT 16681 ||||||| || Sbjct 2362798 CCGTAAGTTT 2362789 >seq37 Length=1071518 Score = 105 bits (116), Expect = 1e-18 Identities = 86/102 (84%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| ||| || || |||||||| || ||||||||||| |||| Sbjct 257971 CGCAAAGCGTCACCGCAAGAT-TCTCCGCGACAACATCCAGGGTATCACCAAGCCCGCTA 258029 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 | |||||||| || ||||||||||| ||||||||| | |||| Sbjct 258030 TTCGTCGTCTTGCGCGTCGTGGTGGTGTCAAGCGTATTTCTG 258071 Score = 95.1 bits (104), Expect = 2e-15 Identities = 125/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGAT 16594 || |||| ||||| | |||| || | || ||| ||||| | |||| |||| ||| Sbjct 258149 TGATCTACGAAGAAACCCGTGGCGTCCTCAA-ATCATTCCTTGAATCCGTCATCCGTGAC 258207 Query 16595 GCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTAT 16654 || || |||||||||||||| || | |||||||| || ||| ||||| |||||||| Sbjct 258208 GCCGTCACTTATACCGAGCACGCCAAGAGGAAGACTGTGACTTCCTTGGATGTCGTCTAT 258267 Query 16655 GCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 || | || || || ||||||| |||| || ||||| ||||| ||||| Sbjct 258268 GCGCTTAAGCGACAGGGCCGTACCCTTTACGGATTTGGCGGTTAAACTTCT 258318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075145141580