Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq17 105 6e-18 seq19 100 3e-16 seq27 93.3 4e-14 seq28 89.7 5e-13 >seq17 Length=3189086 Score = 105 bits (116), Expect = 6e-18 Identities = 342/520 (66%), Gaps = 17/520 (3%) Strand=Plus/Plus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCA---ACAGCAGCACCGCG 46143 || ||| | |||||||| |||||||||| || |||||| ||| || | | Sbjct 3106029 CCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCGCTGGATCTCGGACA--AGGAGTCCA 3106086 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 |||| || |||| | || || || || ||| ||||| |||| || |||||| | Sbjct 3106087 CCTTT-GCTCAGCGCCTTGTCGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCT 3106145 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 |||||| | ||||| | | || | || | ||||| ||| |||| || |||| Sbjct 3106146 TTTGCCTCTATCTTCTGGTTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAAC 3106205 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT 46323 ||||| || || || |||||||| || || || |||||||| || || | || | || Sbjct 3106206 GAGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTG-CT-TGCTCTT---CT 3106260 Query 46324 CGCGTGCACGACAAGCTTGC--GCCCGACACCGTGCTGAG--CATGTTCAAGGAGGCGGT 46379 | | | | |||| | | | |||| | | | ||| ||| | || || || Sbjct 3106261 CCCAC-CTCAACAACCGTCCTAGCCCCA-AGATTATTGAAGACATCATTGTTGACGCCGT 3106318 Query 46380 GGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGC 46439 |||||||| | ||||| || || | ||| || ||| || |||| || |||||| | Sbjct 3106319 TGCCATTGAACAAGAGTTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAACTC 3106378 Query 46440 ACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCA 46499 ||| |||||| | ||||||||||| || || ||||| || | || ||| | | Sbjct 3106379 GAAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTGCTCTTGGCAA 3106438 Query 46500 GCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGG 46559 |||| | | |||| ||| || ||||| || ||| | |||||||| || | || Sbjct 3106439 CAAGAAGTACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTGCCGG 3106498 Query 46560 CAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTATAAG 46599 ||| || || || ||||| ||||| || || || ||| || Sbjct 3106499 CAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTATCAG 3106538 >seq19 Length=2486755 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||| ||||| || || | ||| |||||||| || ||||||||||| Sbjct 1821832 GCCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGA 1821773 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| || ||||| ||||| || || | || || ||||||||||| || || Sbjct 1821772 AAGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGG 1821713 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || |||||| ||| | | || | || || | || |||| Sbjct 1821712 GATACCCTCCTTATCTTGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGAC 1821653 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| | || || |||||||||||||| Sbjct 1821652 TTCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1821605 Score = 98.7 bits (108), Expect = 9e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 131050 TGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAA 131109 ||||||||||| || | |||||| ||| || ||||||||||| || |||| ||| Sbjct 1820785 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 1820726 Query 131110 CGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACA 131169 ||||||||||| ||||| || || || ||||| || || ||||| | || | Sbjct 1820725 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1820666 Query 131170 GTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATC 131229 ||||| | ||||| | || | ||| | ||| || || || || || || ||||| ||| Sbjct 1820665 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 1820606 Query 131230 TGCATGA 131236 ||||||| Sbjct 1820605 TGCATGA 1820599 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 |||||| |||||||| || ||| |||| |||||||||||||| |||||||| || || || Sbjct 1821040 GTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTT 1820981 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 || || || ||||| | || | || || | |||||| | || | ||| | Sbjct 1820980 ATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGAT 1820921 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| || ||||| ||||| || || || || ||||| Sbjct 1820920 GGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 1820885 >seq27 Length=4195530 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || || || | || |||||||| || |||||||| ||| Sbjct 1512083 CCACCACGGAGGCGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1512024 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || |||||||| || ||| |||| |||||||||||||| || ||| Sbjct 1512023 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGG 1511964 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 1511963 ATACCCTCCTTGTC 1511950 >seq28 Length=3612999 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | ||||| || || |||||||| || || ||| Sbjct 1575653 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGA 1575594 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||| || ||||| || || ||||| ||| || ||||| | | Sbjct 1575593 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1575534 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| |||||||| |||| ||| | ||| || || || || || || |||| Sbjct 1575533 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 1575474 Query 131225 AA 131226 || Sbjct 1575473 AA 1575472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012445990400