Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015-
01-16] 60 sequences; 36,402,801 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq17 165 2e-35
seq37 107 4e-18
>seq17
Length=3189086
Score = 165 bits (182), Expect = 2e-35
Identities = 323/474 (68%), Gaps = 14/474 (3%)
Strand=Plus/Minus
Query 251524 TTCATCACACCTGGACGTTGATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCC 251583
||||| ||||| | ||||| ||| ||||| |||||||| || | ||||||
Sbjct 3106555 TTCATGACACCAGCCTTCTGATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCG 3106496
Query 251584 TCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGG 251643
| |||||||| |||||||||||| |||||||| ||||| ||||| | ||| | |
Sbjct 3106495 GCAAGAGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTG 3106436
Query 251644 CCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAG 251703
||||| || || |||| ||||| || || ||||| | ||||| | ||||| | |||
Sbjct 3106435 CCAAGAGCAACCAAGAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAG 3106376
Query 251704 TTCATGCCAATCATACGACAAGGAATTGCCTCACAGATGAATTCCTTTTCGTTGGCAACT 251763
||||| || | || | || |||| || || | ||| || | ||| |||||||
Sbjct 3106375 TTCATTCCGAGCAAAGCGCAGGGAAGAGCGTCGGTCAAGAACTCTTGTTCAATGGCAACG 3106316
Query 251764 GCCTCCTCCACAAT--TGCCTTCA-----CCTGTGCCAGAGACAGCTTGTTCTCCAGCTT 251816
| | || ||||| || ||||| | || | | ||| | ||||| || |
Sbjct 3106315 G---CGTCAACAATGATGTCTTCAATAATCTTGGGGCTAGGAC-GGTTGTT---GAGGTG 3106263
Query 251817 TGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGACTGATGAACTCGTT 251876
||| | || | | |||| | ||| ||||||||||| ||| ||| | ||||||
Sbjct 3106262 GGAGAAGAGCAAGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTT 3106203
Query 251877 GGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGA 251936
||| | || ||||||||||| ||||| ||| | | ||||||||| | | ||| ||
Sbjct 3106202 GGAGAAGGTCAAGCCAGGCATCAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGA 3106143
Query 251937 TCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCGCTCAGCAAA 251990
|||||||| | | |||||| ||| | |||| |||||||||| ||||||
Sbjct 3106142 GCCAGAGAAGAAGATACCCTCAACAGCAGCGAATGCGACAAGGCGCTGAGCAAA 3106089
>seq37
Length=1071518
Score = 107 bits (118), Expect = 4e-18
Identities = 156/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 280138 TCAACTCGCAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTA 280197
||| || ||||| ||| | || || |||| ||||||||| ||||| ||||| || |
Sbjct 274595 TCACCTTCCAGGTCTCTCTTGGATCTCGTATTGCTGTCATTGGTCCCAACGGTGCCGGCA 274536
Query 280198 AGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCA-GGCCACTGAGGGGTCCGTTTGG 280256
||||||| || |||| ||||||||||| || || | |||||| || || |
Sbjct 274535 AGTCTACTCTTGTCAACGTCCTGACTGGTGA-ACTTATCCCCACTGCTGGTGAGGTCTAC 274477
Query 280257 AAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAAC 280316
|||| ||||| || || |||||| | || ||||||||| ||||| || |||
Sbjct 274476 CAGCACGAGAACATCCGTATTGCTTACATTAAACAACACGCTTTCGCTCACATTGATAAC 274417
Query 280317 CACCTGGACATGACTCCTAACCAATACATTCAGTGGCG 280354
|| || |||| ||||||| | | ||||||||||||||
Sbjct 274416 CATCTCGACAAGACTCCTTCCGAGTACATTCAGTGGCG 274379
Score = 100 bits (110), Expect = 6e-16
Identities = 126/168 (75%), Gaps = 4/168 (2%)
Strand=Plus/Minus
Query 280657 TTGAGGACCA-TATGACCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATT 280715
|||||| ||| | || |||| | ||||| || | ||| || | |||||||||||
Sbjct 274031 TTGAGGTCCACTGTG-CCAACTTCGGTCTCGATGCTGAGCTTGTTTCCCACTCTCGCATG 273973
Query 280716 CGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGC-AGCTCTGTGGCAACA 280774
|| ||||||||||| || ||| ||||| ||||| ||| || ||||| |||||||
Sbjct 273972 CGTGGTCTTTCTGGTGGTCAGCGTGTCAAGGTTGTCCTCGCCGCTTGCTCT-TGGCAACG 273914
Query 280775 CCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|||||| ||||||| || |||||||| || ||||| || ||||| ||
Sbjct 273913 TCCTCACTTGATCGTCCTTGACGAGCCCACTAACTACCTTGACCGTGA 273866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836009850460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |