Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq17 165 2e-35 seq37 107 4e-18 >seq17 Length=3189086 Score = 165 bits (182), Expect = 2e-35 Identities = 323/474 (68%), Gaps = 14/474 (3%) Strand=Plus/Minus Query 251524 TTCATCACACCTGGACGTTGATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCC 251583 ||||| ||||| | ||||| ||| ||||| |||||||| || | |||||| Sbjct 3106555 TTCATGACACCAGCCTTCTGATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCG 3106496 Query 251584 TCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGG 251643 | |||||||| |||||||||||| |||||||| ||||| ||||| | ||| | | Sbjct 3106495 GCAAGAGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTG 3106436 Query 251644 CCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAG 251703 ||||| || || |||| ||||| || || ||||| | ||||| | ||||| | ||| Sbjct 3106435 CCAAGAGCAACCAAGAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAG 3106376 Query 251704 TTCATGCCAATCATACGACAAGGAATTGCCTCACAGATGAATTCCTTTTCGTTGGCAACT 251763 ||||| || | || | || |||| || || | ||| || | ||| ||||||| Sbjct 3106375 TTCATTCCGAGCAAAGCGCAGGGAAGAGCGTCGGTCAAGAACTCTTGTTCAATGGCAACG 3106316 Query 251764 GCCTCCTCCACAAT--TGCCTTCA-----CCTGTGCCAGAGACAGCTTGTTCTCCAGCTT 251816 | | || ||||| || ||||| | || | | ||| | ||||| || | Sbjct 3106315 G---CGTCAACAATGATGTCTTCAATAATCTTGGGGCTAGGAC-GGTTGTT---GAGGTG 3106263 Query 251817 TGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGACTGATGAACTCGTT 251876 ||| | || | | |||| | ||| ||||||||||| ||| ||| | |||||| Sbjct 3106262 GGAGAAGAGCAAGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTT 3106203 Query 251877 GGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGA 251936 ||| | || ||||||||||| ||||| ||| | | ||||||||| | | ||| || Sbjct 3106202 GGAGAAGGTCAAGCCAGGCATCAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGA 3106143 Query 251937 TCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCGCTCAGCAAA 251990 |||||||| | | |||||| ||| | |||| |||||||||| |||||| Sbjct 3106142 GCCAGAGAAGAAGATACCCTCAACAGCAGCGAATGCGACAAGGCGCTGAGCAAA 3106089 >seq37 Length=1071518 Score = 107 bits (118), Expect = 4e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 280138 TCAACTCGCAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTA 280197 ||| || ||||| ||| | || || |||| ||||||||| ||||| ||||| || | Sbjct 274595 TCACCTTCCAGGTCTCTCTTGGATCTCGTATTGCTGTCATTGGTCCCAACGGTGCCGGCA 274536 Query 280198 AGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCA-GGCCACTGAGGGGTCCGTTTGG 280256 ||||||| || |||| ||||||||||| || || | |||||| || || | Sbjct 274535 AGTCTACTCTTGTCAACGTCCTGACTGGTGA-ACTTATCCCCACTGCTGGTGAGGTCTAC 274477 Query 280257 AAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAAC 280316 |||| ||||| || || |||||| | || ||||||||| ||||| || ||| Sbjct 274476 CAGCACGAGAACATCCGTATTGCTTACATTAAACAACACGCTTTCGCTCACATTGATAAC 274417 Query 280317 CACCTGGACATGACTCCTAACCAATACATTCAGTGGCG 280354 || || |||| ||||||| | | |||||||||||||| Sbjct 274416 CATCTCGACAAGACTCCTTCCGAGTACATTCAGTGGCG 274379 Score = 100 bits (110), Expect = 6e-16 Identities = 126/168 (75%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 280657 TTGAGGACCA-TATGACCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATT 280715 |||||| ||| | || |||| | ||||| || | ||| || | ||||||||||| Sbjct 274031 TTGAGGTCCACTGTG-CCAACTTCGGTCTCGATGCTGAGCTTGTTTCCCACTCTCGCATG 273973 Query 280716 CGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGC-AGCTCTGTGGCAACA 280774 || ||||||||||| || ||| ||||| ||||| ||| || ||||| ||||||| Sbjct 273972 CGTGGTCTTTCTGGTGGTCAGCGTGTCAAGGTTGTCCTCGCCGCTTGCTCT-TGGCAACG 273914 Query 280775 CCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 |||||| ||||||| || |||||||| || ||||| || ||||| || Sbjct 273913 TCCTCACTTGATCGTCCTTGACGAGCCCACTAACTACCTTGACCGTGA 273866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836009850460