Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq19 176 8e-39 seq28 147 4e-30 seq17 127 4e-24 seq36 123 5e-23 seq27 86.0 1e-11 >seq19 Length=2486755 Score = 176 bits (194), Expect = 8e-39 Identities = 181/234 (77%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || || || ||||| || || | |||||||| || |||||||| || |||||||| ||| Sbjct 1821837 TAGTTGCCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAA 1821778 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 || || || || | |||||||||| ||||| || || || || | || || |||||| Sbjct 1821777 TCAGAAAGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCG 1821718 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGA 68407 ||||| || || ||||| ||||| || ||||| ||| || || |||||||||| || Sbjct 1821717 GGTGGGATACCCTCCTTATCTTGGAT-TTTGCTCTTCACATTGTCAATGGTGTCTGACGA 1821659 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| |||||||| ||||| || ||||| || | |||||||||||| |||||||| Sbjct 1821658 TTCGACTTCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1821605 Score = 138 bits (152), Expect = 2e-27 Identities = 144/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 68277 TGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGT 68336 || ||||| || || || || || | || ||||| | |||||| || || || || | Sbjct 1820785 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 1820726 Query 68337 CTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATG 68396 | || ||||| || |||||||| |||||||| |||||||| | ||||||| |||||| Sbjct 1820725 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1820666 Query 68397 GTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATC 68456 || || | || || || || | ||||||||| || || ||||||||||||||||| ||| Sbjct 1820665 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 1820606 Query 68457 TGCATTATG 68465 ||||| ||| Sbjct 1820605 TGCATGATG 1820597 Score = 100 bits (110), Expect = 5e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 || || || | |||||| || ||||| || | | || ||||| || || || || ||| Sbjct 1821042 CCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCC 1820983 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 || || |||||||| | ||||||| ||||||||||| | || || || || | |||| Sbjct 1820982 TTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTG 1820923 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || || |||||||| || || ||||| Sbjct 1820922 ATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 1820885 >seq28 Length=3612999 Score = 147 bits (162), Expect = 4e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||||||| || | |||||||| | |||||| ||||| || || Sbjct 1575651 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 1575592 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || |||||||| || || || |||||||| || ||||| | |||||| ||| Sbjct 1575591 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1575532 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | ||||||||| || |||||||||||||||||||| Sbjct 1575531 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1575473 >seq17 Length=3189086 Score = 127 bits (140), Expect = 4e-24 Identities = 185/260 (71%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 9933 TTCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCC 9992 |||||||| || |||||||| || || || || |||||||||||||| |||||| Sbjct 3106555 TTCATGACACCAGCCTTCTGATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCG 3106496 Query 9993 TCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAA 10052 | || || ||| ||||||||||||||||||||| |||| | | ||| || Sbjct 3106495 GCAAGAGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTG 3106436 Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112 || || || || | |||||||| ||||||||||||||||||| ||||| | |||| Sbjct 3106435 CCAAGAGCAACCAAGAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAG 3106376 Query 10113 TTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172 ||||| || | || |||||| | |||||| | ||| || | ||| |||| || Sbjct 3106375 TTCATTCCGAGCAAAGCGCAGGGAAGAGCGTCGGTCAAGAACTCTTGTTCAATGGCAACG 3106316 Query 10173 GCTTCCTCGACGATGCTCTT 10192 || || | | |||| |||| Sbjct 3106315 GCGTCAACAATGATG-TCTT 3106297 >seq36 Length=3550 Score = 123 bits (136), Expect = 5e-23 Identities = 364/543 (67%), Gaps = 21/543 (4%) Strand=Plus/Minus Query 185897 TCACGGAAGTTGTCCGAGTCTGACTTCATTGCAAGCCTGTAAATACCAATGGTCTTGACA 185956 || ||||||||||||||| | |||||||| |||| ||| | || | | || | Sbjct 617 TCGCGGAAGTTGTCCGAGCCGGACTTCATGATCAGCCGGTAGACGCCGACGACCTGG--- 561 Query 185957 TTGCCTGCGCGGTGCACGATTTCG-TCGACGATTGCCTGCTTCCTGACGGTGTTCGATGT 186015 | || | ||| ||| ||| ||| ||| ||| | ||| | | |||||| | Sbjct 560 --GGCT-CACGGCGCAGGATGTCGGTCG-CGACGAAGTCCTTGCGGGTGGTGTTGGCCTC 505 Query 186016 CACGATGGCGCCAATCATGGTCTGTGGAATGCCCTCGAAGTTTGCGAGCAGCTGCTTCGT 186075 ||||| || || | | |||| || | | ||| | |||| || |||||||||| || Sbjct 504 GACGATCGCCGAGATGAGGTTCTGCGGGACGTCCTGGTAGTTGGCCTGCAGCTGCTTGGT 445 Query 186076 GTCCTTGGGGAAGCAGTAGCCGCCGTAGCCGAAGCTCGGGTTGCAATAGCCTCCGCCAAT 186135 |||||| || | ||||||||||||||||||||||||||||||| ||| ||| || Sbjct 444 GTCCTTCGGCAGGCAGTAGCCGCCGTAGCCGAAGCTCGGGTTGTTGTAGTGCGAGCCGAT 385 Query 186136 ACGTGGCTCGTGCGTGATGCCCTCGATGATGTCCTTTGCATTCAGACCATTCACCATTGC 186195 || || || | || |||||||||||| | | | || || || | || Sbjct 384 CCGGGGGTCCAGGCCGACGCCCTCGATGATCTGGGTCGTGTTGAGGCCGTGGGTGGCGGC 325 Query 186196 AAACGAGTCGAGCTCATTGAAAAACGACACGCGCATCG-CGAGGTACGT-ATTCGCAAAC 186253 | | ||||||||| ||||| | | || |||| || | ||||| || || || ||| Sbjct 324 GTAGGTGTCGAGCTCGTTGAAGTAGGCGACCCGCAGCGCCCAGGTAGGTGTTTGGCGAAC 265 Query 186254 AACTTGA-CGCTCTCTGCCTCGCGTGTTGAC-ATGAACAGCTTTGGCACATC---CTTGA 186308 | ||||| ||| ||| |||||| ||| | | | | |||| || || || || || Sbjct 264 AGCTTGATCGC-CTCGGCCTCG-GTGGCGCCGGTCATCAGCACCGGTACGTCGGGCTCGA 207 Query 186309 TGAGAGACTCGCGGCCGAGCATCTCTACGAATGCAGTGGCGTTTTC-GCCTTCGTCGCCA 186367 | ||| | | || | |||| ||| |||| | | ||| | | |||||||| Sbjct 206 -GCGAG-CCCTCGAGC-AGCAGCTCGGCGAAGCCCTTCGCGGCCGCGGGAGTCGTCGCCG 150 Query 186368 ATGATGATGCGAGAGGGGTGGAGGTTGTCGTAGAGTGCACGACCCTCGCGCAGGAACTCC 186427 | || |||||| |||||||| |||||||||| ||| || |||||||| |||||||| Sbjct 149 ACGACGATGCGGGAGGGGTGCAGGTTGTCGTGGAGCGCCTTGCCCTCGCGGAGGAACTCG 90 Query 186428 GGG 186430 ||| Sbjct 89 GGG 87 >seq27 Length=4195530 Score = 86.0 bits (94), Expect = 1e-11 Identities = 156/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 225414 TCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAA 225473 |||||||||| || ||| ||| ||| | || | |||||| |||||||| |||| Sbjct 3469870 TCTCGTAATGGTAGATATCCGTGCAGACTTCATCCAAGAAGCCGGAGTCGTGACTGACAA 3469811 Query 225474 TGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATG-AGCCATGCCACGTTGCTG 225532 | | | | || || || ||||||||| | || |||||| || ||| Sbjct 3469810 TCAAACTGGTGATGTCGGTGTGGGCCTTGAGGTAT-TCTTGCAGCCATTTGACATTGGCA 3469752 Query 225533 ACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCG 225592 ||||| | ||||| ||||||||||| || || || | ||| || | ||||| || || Sbjct 3469751 ACGTCGAGATGGTTAGTAGGTTCGTCGAGGAGGAGAACGTCGGCTTTCATGAGCATAGCA 3469692 Query 225593 CGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGA 225638 || | ||||| |||||||| ||||| || ||||| || || |||| Sbjct 3469691 CGGGCGAGAGCGAGCTTCATCTTCCAACCACCGGAGAGTGATCCGA 3469646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621708783200