Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq17 147 4e-30 seq27 132 9e-26 >seq17 Length=3189086 Score = 147 bits (162), Expect = 4e-30 Identities = 349/520 (67%), Gaps = 17/520 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 |||||||| |||||||| |||||||| || ||||||| | || | || Sbjct 3106029 CCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCGCTGGATCTCGGACAAGGAGTCCACC 3106088 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 || | || | || || || || | || || ||||| ||||||||||| ||| | || Sbjct 3106089 TTTGCTCAGCGCCTTGTCGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTT 3106148 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAAGGTG--TCGATGCCCGGACTCACCTTCTCGAACG 42810 ||||| ||||||||| | ||| || ||| | |||||| || | |||||||| |||| Sbjct 3106149 GCCTCTATCTTCTGGTTGAAG--AAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACG 3106206 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 | || ||| | |||||||| || || | |||||||||||| | || ||||| || Sbjct 3106207 AGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCTC---CC 3106263 Query 42871 ACCTCAGGCACAAGCCCTCGAAG----GAGCGGGTCCGGGCCATCATCACGGAGGCCGTG 42926 |||||| |||| || || || || | | |||||| || ||||| Sbjct 3106264 ACCTCA---ACAA-CCGTCCTAGCCCCAAGATTATTGAAGACATCATTGTTGACGCCGTT 3106319 Query 42927 GAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCAC 42986 | || || | |||||| | || | | || ||| | || |||| |||||| Sbjct 3106320 GCCATTGAACAAGAGTTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAACTCG 3106379 Query 42987 GACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCT 43045 | | |||||| |||||||| ||| ||| || |||| |||| | || | ||| Sbjct 3106380 AAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTGCTCTTGGCAAC 3106439 Query 43046 CAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGG 43105 || | ||||||| | | |||||| ||||| |||||||||||||| | | || Sbjct 3106440 AAGAAG-TACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTGCCGG 3106498 Query 43106 CAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||||||| ||||||||||| || | ||||| ||| Sbjct 3106499 CAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTATCAG 3106538 >seq27 Length=4195530 Score = 132 bits (146), Expect = 9e-26 Identities = 489/760 (64%), Gaps = 16/760 (2%) Strand=Plus/Minus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 |||| |||||||| || ||||| || | ||| | | |||||| ||||||||| Sbjct 142452 GCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTATTCAATAATCTCTGTGCAGAGG 142393 Query 244748 TTACTGCACTT--GATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805 || | ||| ||| || || |||| || || ||| ||| |||||| || |||| Sbjct 142392 TTG--GAACTACGGATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTGTTGCAAGCATCCT 142335 Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGT 244865 ||||||||||||| || || ||||| ||| || |||||| | || |||||| | Sbjct 142334 TGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCGTACCAGAGCT 142275 Query 244866 CCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925 | ||||||||| || | ||| | || || |||||| ||||| || | Sbjct 142274 TCTGAGCCTTGACGGTACGACGACCACGACCTTCCCTCTCGTACTTCTCGTACAAAGCAT 142215 Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGG--GGCACGACGCCGGGCACATGAGACT 244983 | ||||| ||| |||| ||| | || |||| | | || ||||| | | | Sbjct 142214 CAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTA--GGGCAGAACAATGT 142157 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| || | | | | || | |||||||||| || ||| |||| | ||| | ||| Sbjct 142156 CCAGTCTTGGTTGGCTTCTACACGACGCATGAAGAGATCAGGGGTCCACAAGGCATAGAA 142097 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103 || || | || | || || ||| |||||| | || || | || ||||| Sbjct 142096 CAGATCACGGGCACGGACTTCTTCTTTGCCGTGGTTCTTGCGAAGGTCAAGGAACTCAAA 142037 Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 || || |||||||||||| | ||||| ||| | || || || |||||||| ||||| Sbjct 142036 AACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCACCAGGGCGCTTGTTACCTCC 141977 Query 245164 CTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGA 245223 ||||| || || || |||||| | | || ||||||| | ||||| || Sbjct 141976 TTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGGCACAAGACCGTTTGA 141917 Query 245224 GTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT--- 245280 || ||||| || |||||||| || || | || ||| | ||||||| Sbjct 141916 AGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAAC---GGATGC-GGTGGACATTGA 141861 Query 245281 -GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339 || | || ||||| ||||||||| | || || |||||| || || || | Sbjct 141860 GACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCTTGAGAGTATCATAGATAC 141801 Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399 |||| |||||||| |||||||| | || ||||| || | ||||| || || Sbjct 141800 CCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCGAGGAG 141741 Query 245400 TGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 | | | |||||||| |||||| ||||| || ||||| Sbjct 141740 TACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTA 141701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338491745600