Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq19 125 2e-23 seq28 107 5e-18 >seq19 Length=2486755 Score = 125 bits (138), Expect = 2e-23 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | |||| ||| || || ||||| || || || | Sbjct 1821831 CCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAA 1821772 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||||| ||| || || || || |||| ||||| || |||| Sbjct 1821771 AGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGG 1821712 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || ||||| |||||||| ||| ||||| || || || | || |||||| || Sbjct 1821711 ATACCCTCCTTATCTTGGATTTT-GCTCTTCACATTGTCAATGGTGTCTGACGATTCGAC 1821653 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| | ||||| ||||| ||||||| ||||||||||| |||||||| Sbjct 1821652 TTCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1821605 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 288289 TGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGA 288348 || || || ||||| | || ||||| |||||||| | || || || || ||||||| | Sbjct 1820785 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 1820726 Query 288349 CGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408 ||||| || | || || || || || ||||| || || | || ||||| || || Sbjct 1820725 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1820666 Query 288409 GAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATC 288468 | ||| || || || || || ||||| |||||||| || || ||||||||||| ||| Sbjct 1820665 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 1820606 Query 288469 TGCATTATG 288477 ||||| ||| Sbjct 1820605 TGCATGATG 1820597 Score = 91.5 bits (100), Expect = 3e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 ||||| || | || ||||| |||||||||| |||||| || | ||||| || || Sbjct 1821042 CCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCC 1820983 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 |||||||| || || | || ||||| || || | || || || || || || ||| Sbjct 1820982 TTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTG 1820923 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||||||||| || || ||||| Sbjct 1820922 ATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 1820885 >seq28 Length=3612999 Score = 107 bits (118), Expect = 5e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| ||||| || ||||| | || ||||| || |||||| Sbjct 1575651 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 1575592 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||| || ||||| || || || |||||||| || | || || || || Sbjct 1575591 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1575532 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | ||| || || || ||||| ||||| ||||| || || || ||||||||||| Sbjct 1575531 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1575473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653493140680