Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq19 102 9e-17 seq28 87.8 2e-12 >seq19 Length=2486755 Score = 102 bits (112), Expect = 9e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | ||| |||||| || || |||||||||| ||||| || | Sbjct 1821820 ACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACC 1821761 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || ||||| ||||||||||| || || | |||||||||||||| ||| | | |||||| Sbjct 1821760 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTT 1821701 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 || |||||| || | | | | ||||| |||||| || || | ||||| Sbjct 1821700 ATCTTGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGAT 1821641 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || | ||||| || || || ||||| Sbjct 1821640 AGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1821605 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 42024 TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGT 42083 ||||| ||||| |||| || || || |||| || |||||||| ||||| || || | Sbjct 1820785 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 1820726 Query 42084 CGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCA 42141 ||||||||||| | || | || |||||||||| ||| | || | |||| ||| | | | Sbjct 1820725 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC-TGAATCTTGGACTTGA-CGTTGTCGA 1820668 Query 42142 CCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGA 42201 || || || ||||| || | |||||||| || || || || ||||| || |||| Sbjct 1820667 TGGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGA 1820608 Query 42202 TTTGCAT 42208 | ||||| Sbjct 1820607 TCTGCAT 1820601 Score = 87.8 bits (96), Expect = 2e-12 Identities = 118/159 (74%), Gaps = 4/159 (3%) Strand=Plus/Minus Query 42052 CGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCT 42111 |||| || |||||||| |||||||| || | ||||||||||| | || | | ||||| Sbjct 1821041 CGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCT 1820982 Query 42112 TGTCCATGATTTTTTGT-TTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGT 42169 | ||| ||| | || | |||| ||| | | | ||||| || ||||| || | || Sbjct 1820981 TATCC-TGAATCTTGGACTTGA-CGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGT 1820924 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||| ||||| || || ||||| |||||||||||||| Sbjct 1820923 GATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 1820885 >seq28 Length=3612999 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || | ||||| || | || || |||||||| || || || | Sbjct 1575653 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGA 1575594 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || ||||||||||||| || | | |||||||||| ||| || |||| | Sbjct 1575593 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1575534 Query 42139 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 42198 | | |||||| || || || |||| |||||||| |||||||| || ||||| || | Sbjct 1575533 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 1575474 Query 42199 A 42199 | Sbjct 1575473 A 1575473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212392590400